Os05g0159100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF846, eukaryotic family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0159100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF846, eukaryotic family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.66 | 0.386 | 6.85 | 0.637 | 0.498 | -0.525 | -0.318 | -3.13 | 0.055 | 6.21 | 9.997 | 4510 | -- | -- |
| 73.44 | 0.399 | 6.81 | 0.555 | 0.547 | -0.409 | -0.394 | -- | 0.0358 | 6.17 | 20.19 | 11155 | -- | -- |
| 67.71 | 0.383 | 6.85 | 0.636 | 0.499 | -0.507 | -- | -3.2 | 0.054 | 6.24 | 9.99 | 4672 | -- | -- |
| 72.55 | 0.397 | 6.79 | 0.517 | 0.52 | -0.463 | -- | -- | 0.039 | 6.52 | 20.02 | 12078 | -- | -- |
| 80.75 | 0.419 | 6.85 | 0.643 | -- | -0.371 | -- | -3.15 | 0.0547 | -- | 9.97 | 4357 | -- | -- |
| 78.4 | 0.415 | 6.76 | 0.537 | 0.489 | -- | -0.327 | -- | 0.156 | 6.33 | -- | -- | -- | -- |
| 78.63 | 0.415 | 6.76 | 0.534 | 0.487 | -- | -- | -- | 0.157 | 6.5 | -- | -- | -- | -- |
| 85.08 | 0.43 | 6.79 | 0.583 | -- | -0.402 | -- | -- | 0.0609 | -- | 21.54 | 11570 | -- | -- |
| 78.94 | 0.414 | 6.8 | -- | 0.497 | -0.436 | -- | -- | 0.0108 | 6.62 | 20 | 12161 | -- | -- |
| 90.98 | 0.446 | 6.77 | 0.546 | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
| 86.15 | 0.434 | 6.78 | -- | 0.494 | -- | -- | -- | 0.0975 | 6.44 | -- | -- | -- | -- |
| 91.63 | 0.446 | 6.81 | -- | -- | -0.423 | -- | -- | -0.00283 | -- | 20 | 11669 | -- | -- |
| 98.85 | 0.464 | 6.79 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.89 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 64.55 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 8 | 64.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 9 | 65.16 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 21 | 65.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 27 | 65.76 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 2 |
| 29 | 65.77 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 37 | 65.82 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 42 | 65.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 45 | 65.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 70 | 66.08 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 90 | 66.20 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 91 | 66.21 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 92 | 66.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 95 | 66.24 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 100 | 66.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 101 | 66.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 107 | 66.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 114 | 66.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 117 | 66.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 142 | 66.50 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 144 | 66.51 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 145 | 66.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 149 | 66.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 175 | 66.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 176 | 66.63 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 178 | 66.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 180 | 66.65 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 182 | 66.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 195 | 66.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 198 | 66.71 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 213 | 66.72 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 214 | 66.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 216 | 66.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 241 | 66.78 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 255 | 66.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 258 | 66.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 265 | 66.83 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 290 | 66.83 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 293 | 66.84 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 298 | 66.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 300 | 66.85 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 10 |
| 311 | 66.85 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 314 | 66.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 336 | 66.87 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 344 | 66.89 | humidity | 70.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 398 | 66.91 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 408 | 66.92 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 413 | 66.93 | humidity | 70.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 451 | 66.95 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 500 | 66.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 501 | 66.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 502 | 66.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 510 | 66.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 533 | 67.00 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 536 | 67.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 555 | 67.01 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 573 | 67.02 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 574 | 67.02 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 581 | 67.03 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 628 | 67.04 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 639 | 67.05 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 640 | 67.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 665 | 67.06 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 758 | 67.09 | radiation | 1.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 769 | 67.09 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 790 | 67.10 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 796 | 67.10 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 818 | 67.11 | radiation | 1.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 851 | 67.12 | radiation | 1.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 852 | 67.12 | radiation | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 977 | 67.15 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 17 |