Os05g0157000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0157000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.04 | 0.513 | 3.42 | 0.173 | 0.128 | 1.16 | 0.519 | -2.81 | 0.016 | 11.4 | 21.37 | 714 | -- | -- |
| 125.65 | 0.522 | 3.44 | 0.0519 | 0.0777 | 1.96 | -0.0408 | -- | 0.0253 | 11.1 | 20.56 | 639 | -- | -- |
| 119.96 | 0.51 | 3.42 | 0.166 | 0.131 | 1.26 | -- | -2.41 | 0.0157 | 12.3 | 21.47 | 652 | -- | -- |
| 124.65 | 0.52 | 3.47 | -0.0253 | 0.12 | 2.2 | -- | -- | -0.0505 | 12.3 | 19.9 | 585 | -- | -- |
| 120.91 | 0.512 | 3.42 | 0.185 | -- | 1.31 | -- | -2.32 | 0.0303 | -- | 21.73 | 694 | -- | -- |
| 157.2 | 0.588 | 3.5 | -0.449 | 0.238 | -- | -0.0598 | -- | -0.221 | 11.3 | -- | -- | -- | -- |
| 157.21 | 0.587 | 3.5 | -0.451 | 0.238 | -- | -- | -- | -0.221 | 11.3 | -- | -- | -- | -- |
| 125.49 | 0.522 | 3.47 | -0.0166 | -- | 2.24 | -- | -- | -0.0457 | -- | 19.88 | 612 | -- | -- |
| 124.67 | 0.52 | 3.47 | -- | 0.12 | 2.21 | -- | -- | -0.0462 | 12.3 | 19.91 | 585 | -- | -- |
| 160.76 | 0.592 | 3.51 | -0.457 | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
| 162.59 | 0.596 | 3.49 | -- | 0.243 | -- | -- | -- | -0.171 | 11.4 | -- | -- | -- | -- |
| 125.49 | 0.522 | 3.47 | -- | -- | 2.24 | -- | -- | -0.0442 | -- | 19.9 | 614 | -- | -- |
| 166.28 | 0.602 | 3.5 | -- | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.11 | temperature | 20 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 3 | 120.17 | temperature | 20 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 20 | 120.37 | temperature | 20 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 26 | 120.43 | temperature | 20 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 27 | 120.43 | temperature | 20 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 32 | 120.49 | temperature | 20 | 720 | < th | dose dependent | no | NA | NA |
| 86 | 121.08 | temperature | 20 | 720 | < th | dose dependent | sin | 11 | NA |
| 239 | 122.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 244 | 122.96 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 306 | 123.44 | temperature | 20 | 1440 | < th | dose dependent | sin | 4 | NA |
| 353 | 123.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 407 | 124.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 453 | 124.49 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 455 | 124.50 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 21 |
| 495 | 124.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 567 | 125.06 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 22 |
| 713 | 125.56 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 22 |
| 722 | 125.58 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 22 |
| 763 | 125.69 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 22 |
| 818 | 125.81 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 861 | 125.92 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 922 | 126.07 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 935 | 126.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 972 | 126.18 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 992 | 126.23 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |