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Os05g0156200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.53 (0.0148) R2 : 0.0123
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0746 (0.0312) R2dN8 : 0.0159 R2N8 : 0.0123
σ : 0.279
deviance : 35.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.68 0.247 8.54 -0.219 0.397 -0.551 0.339 0.316 -0.168 5.64 92.82 271 -- --
27.75 0.245 8.54 -0.216 0.402 -0.549 0.455 -- -0.163 5.67 92.83 271 -- --
27.75 0.245 8.54 -0.229 0.374 -0.626 -- 0.792 -0.157 5.57 93.7 252 -- --
28.21 0.247 8.54 -0.218 0.387 -0.575 -- -- -0.16 5.57 93.41 270 -- --
32.21 0.264 8.54 -0.263 -- -0.482 -- 1.79 -0.115 -- 96 199 -- --
30.98 0.261 8.53 -0.249 0.245 -- 0.267 -- -0.106 5.87 -- -- -- --
31.14 0.261 8.54 -0.248 0.247 -- -- -- -0.107 5.64 -- -- -- --
33.21 0.268 8.54 -0.244 -- -0.591 -- -- -0.114 -- 96 195 -- --
29.44 0.253 8.54 -- 0.399 -0.546 -- -- -0.142 5.55 92.86 270 -- --
34.31 0.274 8.54 -0.24 -- -- -- -- -0.101 -- -- -- -- --
32.76 0.268 8.53 -- 0.243 -- -- -- -0.0795 5.68 -- -- -- --
34.79 0.275 8.54 -- -- -0.592 -- -- -0.0827 -- 95.67 238 -- --
35.83 0.279 8.53 -- -- -- -- -- -0.0746 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.33 humidity 80.0 90 > th dose dependent rect. 1 9
4 26.49 wind 5.0 90 < th dose independent rect. 7 18
6 26.50 humidity 80.0 270 > th dose dependent rect. 23 8
8 26.54 humidity 80.0 90 > th dose dependent sin 5 NA
21 26.74 humidity 80.0 90 > th dose dependent rect. 1 13
22 26.75 wind 5.0 90 < th dose independent rect. 6 22
33 26.82 temperature 20.0 270 > th dose independent rect. 1 17
52 26.91 humidity 80.0 90 > th dose independent rect. 1 9
55 26.91 humidity 80.0 90 > th dose dependent rect. 1 17
69 26.98 wind 9.0 90 < th dose dependent rect. 7 18
89 27.06 humidity 90.0 270 > th dose independent rect. 23 9
110 27.11 wind 5.0 10 < th dose independent rect. 7 22
161 27.25 atmosphere 1000.0 90 > th dose independent rect. 1 6
162 27.25 wind 7.0 270 < th dose independent rect. 17 8
171 27.26 humidity 80.0 90 > th dose dependent rect. 3 7
223 27.34 radiation 10.0 30 < th dose dependent rect. 5 13
285 27.42 humidity 90.0 270 < th dose independent rect. 18 15
292 27.43 radiation 1.0 270 < th dose independent sin 5 NA
293 27.43 humidity 90.0 270 < th dose independent rect. 20 13
294 27.43 radiation 1.0 270 < th dose independent rect. 1 14
295 27.43 radiation 1.0 270 > th dose independent rect. 17 21
298 27.43 wind 9.0 10 < th dose dependent rect. 7 18
313 27.46 radiation 1.0 270 < th dose independent rect. 1 17
324 27.47 precipitation 0.1 270 < th dose independent rect. 17 8
330 27.47 precipitation 0.1 270 < th dose dependent rect. 17 8
336 27.48 atmosphere 995.0 43200 > th dose independent rect. 14 8
352 27.49 radiation 1.0 10 > th dose independent rect. 7 9
376 27.51 humidity 90.0 90 < th dose independent sin 4 NA
390 27.52 wind 7.0 30 < th dose independent rect. 7 9
412 27.54 atmosphere 1000.0 10 > th dose independent rect. 1 6
418 27.54 atmosphere 995.0 43200 < th dose dependent rect. 15 7
423 27.54 radiation 20.0 90 < th dose dependent rect. 1 17
432 27.55 temperature 20.0 270 > th dose independent rect. 12 18
443 27.56 wind 7.0 270 < th dose independent rect. 18 18
457 27.57 atmosphere 995.0 270 > th dose independent rect. 1 16
462 27.58 humidity 90.0 270 < th dose independent sin 7 NA
464 27.58 temperature 20.0 270 > th dose independent rect. 1 5
466 27.58 humidity 90.0 90 < th dose independent rect. 3 12
469 27.58 wind 9.0 90 < th dose dependent rect. 7 9
476 27.58 wind 9.0 90 < th dose dependent rect. 6 22
504 27.61 wind 1.0 4320 < th dose dependent rect. 17 4
520 27.62 radiation 10.0 270 < th dose dependent rect. 1 14
523 27.63 temperature 15.0 270 > th dose independent rect. 17 8
535 27.64 atmosphere 995.0 43200 < th dose independent rect. 14 8
537 27.64 humidity 90.0 90 < th dose independent rect. 20 19
550 27.65 wind 1.0 4320 > th dose independent rect. 17 6
553 27.65 radiation 20.0 270 < th dose independent rect. 17 8
556 27.65 temperature 10.0 270 > th dose independent rect. 1 16
557 27.65 humidity 90.0 90 < th dose independent rect. 23 16
558 27.65 atmosphere 1015.0 270 < th dose independent rect. 1 16
579 27.66 humidity 50.0 270 > th dose independent rect. 17 8
581 27.66 humidity 90.0 10 < th dose independent rect. 7 9
596 27.67 humidity 90.0 270 > th dose independent sin 7 NA
597 27.67 temperature 20.0 270 > th dose independent rect. 12 6
598 27.67 humidity 90.0 270 > th dose independent rect. 23 14
624 27.68 radiation 40.0 270 < th dose dependent rect. 17 8
633 27.69 radiation 1.0 270 < th dose independent rect. 1 8
636 27.69 atmosphere 995.0 10 > th dose independent rect. 16 15
645 27.70 humidity 90.0 90 > th dose independent sin 5 NA
649 27.70 temperature 10.0 10 > th dose independent rect. 7 9
651 27.70 atmosphere 1015.0 10 < th dose independent rect. 7 9
652 27.70 precipitation 0.1 10 < th dose independent rect. 7 9
653 27.70 temperature 10.0 10 > th dose independent rect. 16 15
654 27.70 radiation 40.0 10 < th dose independent rect. 16 15
660 27.70 precipitation 0.1 10 < th dose dependent rect. 7 9
664 27.71 radiation 1.0 270 > th dose independent sin 5 NA
684 27.72 humidity 90.0 270 < th dose independent rect. 3 9
687 27.72 humidity 90.0 270 > th dose independent rect. 23 19
690 27.72 radiation 1.0 270 < th dose dependent sin 4 NA
691 27.72 wind 9.0 10 < th dose dependent rect. 7 9
701 27.73 wind 1.0 4320 > th dose independent rect. 20 3
725 27.74 atmosphere 995.0 43200 > th dose independent rect. 13 10
757 27.76 temperature 20.0 90 > th dose independent rect. 5 1
823 27.78 atmosphere 995.0 10 > th dose independent rect. 7 9
831 27.78 temperature 20.0 30 > th dose independent rect. 12 19
846 27.79 atmosphere 995.0 270 > th dose independent rect. 18 7
851 27.79 precipitation 0.1 270 < th dose independent rect. 1 16
869 27.79 precipitation 0.1 270 < th dose dependent rect. 1 16
895 27.80 precipitation 0.1 90 < th dose independent rect. 7 18
906 27.80 precipitation 0.1 90 < th dose dependent rect. 7 18
962 27.82 temperature 10.0 270 > th dose dependent rect. 1 16
971 27.83 atmosphere 995.0 43200 < th dose independent rect. 13 10
974 27.83 radiation 10.0 30 < th dose independent rect. 5 13
976 27.83 temperature 20.0 90 > th dose independent rect. 15 16
988 27.83 radiation 10.0 270 < th dose dependent rect. 1 7