Os05g0154900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0154900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.86 | 0.155 | 10.9 | -0.162 | 0.048 | -0.27 | 0.371 | -0.476 | -0.211 | 15.8 | 28.21 | 4795 | -- | -- |
| 10.96 | 0.154 | 10.9 | -0.296 | 0.043 | -0.312 | 0.375 | -- | -0.236 | 15.6 | 27.8 | 4756 | -- | -- |
| 11.21 | 0.156 | 10.9 | -0.156 | 0.0559 | -0.271 | -- | -0.487 | -0.209 | 13.6 | 28.3 | 4804 | -- | -- |
| 11.31 | 0.157 | 10.9 | -0.28 | 0.0515 | -0.317 | -- | -- | -0.238 | 13.4 | 28.24 | 4794 | -- | -- |
| 11.4 | 0.157 | 10.9 | -0.164 | -- | -0.272 | -- | -0.457 | -0.212 | -- | 28.25 | 4794 | -- | -- |
| 14.23 | 0.177 | 10.9 | -0.181 | 0.053 | -- | 0.385 | -- | -0.21 | 16.4 | -- | -- | -- | -- |
| 14.62 | 0.179 | 10.9 | -0.177 | 0.0569 | -- | -- | -- | -0.208 | 15.1 | -- | -- | -- | -- |
| 11.48 | 0.158 | 10.9 | -0.281 | -- | -0.317 | -- | -- | -0.24 | -- | 28.27 | 4792 | -- | -- |
| 13.19 | 0.169 | 10.9 | -- | 0.0563 | -0.253 | -- | -- | -0.203 | 13.3 | 28.4 | 4807 | -- | -- |
| 14.8 | 0.18 | 10.9 | -0.18 | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
| 15.45 | 0.184 | 10.9 | -- | 0.0604 | -- | -- | -- | -0.188 | 15.1 | -- | -- | -- | -- |
| 13.39 | 0.17 | 10.9 | -- | -- | -0.251 | -- | -- | -0.203 | -- | 28.4 | 4797 | -- | -- |
| 15.65 | 0.185 | 10.9 | -- | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 17 | 10.98 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 18 | 10.98 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 38 | 10.99 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 47 | 11.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 57 | 11.01 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 11 |
| 72 | 11.02 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |
| 82 | 11.03 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 9 |
| 113 | 11.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 184 | 11.10 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 185 | 11.10 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 202 | 11.11 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 216 | 11.12 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 242 | 11.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 244 | 11.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 7 |
| 247 | 11.13 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 253 | 11.13 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 19 |
| 263 | 11.13 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 410 | 11.17 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 456 | 11.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 478 | 11.19 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 479 | 11.19 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 8 |
| 485 | 11.19 | temperature | 25 | 720 | > th | dose dependent | rect. | 24 | 15 |
| 489 | 11.20 | temperature | 30 | 720 | < th | dose independent | sin | 2 | NA |
| 531 | 11.21 | temperature | 30 | 720 | > th | dose independent | sin | 3 | NA |
| 538 | 11.21 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 6 |
| 601 | 11.23 | temperature | 30 | 720 | > th | dose dependent | sin | 6 | NA |
| 611 | 11.24 | temperature | 30 | 4320 | < th | dose independent | sin | 7 | NA |
| 706 | 11.25 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 21 |
| 713 | 11.25 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 726 | 11.26 | temperature | 30 | 4320 | > th | dose independent | sin | 7 | NA |
| 797 | 11.26 | temperature | 30 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 979 | 11.29 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 19 |