Os05g0150800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plastid 5,10-methylene-tetrahydrofolate dehydrogenase (Fragment).
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Os05g0150800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plastid 5,10-methylene-tetrahydrofolate dehydrogenase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.85 | 0.281 | 13.7 | -1.9 | 0.537 | -0.825 | 0.269 | -0.631 | -0.622 | 2.09 | 27.7 | 233 | -- | -- |
| 36.29 | 0.281 | 13.7 | -2 | 0.535 | -0.8 | 0.121 | -- | -0.645 | 2.05 | 27.98 | 259 | -- | -- |
| 36.06 | 0.28 | 13.7 | -1.94 | 0.527 | -0.824 | -- | -0.45 | -0.63 | 2.19 | 27.7 | 251 | -- | -- |
| 36.3 | 0.281 | 13.7 | -2.01 | 0.528 | -0.812 | -- | -- | -0.642 | 2.22 | 28 | 270 | -- | -- |
| 39.41 | 0.292 | 13.7 | -1.97 | -- | -0.943 | -- | -0.504 | -0.649 | -- | 27.6 | 981 | -- | -- |
| 45.24 | 0.315 | 13.7 | -1.81 | 0.358 | -- | 0.0757 | -- | -0.475 | 0.863 | -- | -- | -- | -- |
| 45.27 | 0.315 | 13.7 | -1.81 | 0.358 | -- | -- | -- | -0.475 | 0.871 | -- | -- | -- | -- |
| 39.69 | 0.293 | 13.7 | -2.07 | -- | -0.923 | -- | -- | -0.672 | -- | 28 | 987 | -- | -- |
| 131.76 | 0.535 | 13.6 | -- | 0.311 | 0.0902 | -- | -- | -0.263 | 0.433 | 35.35 | 103 | -- | -- |
| 53.26 | 0.341 | 13.7 | -1.8 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 131.85 | 0.537 | 13.6 | -- | 0.329 | -- | -- | -- | -0.273 | 0.628 | -- | -- | -- | -- |
| 136.41 | 0.544 | 13.6 | -- | -- | 0.323 | -- | -- | -0.217 | -- | 29.8 | 42 | -- | -- |
| 138.66 | 0.55 | 13.6 | -- | -- | -- | -- | -- | -0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 5 | 33.61 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 8 | 33.62 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 14 | 33.73 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 20 | 33.94 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 24 | 34.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 26 | 34.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 28 | 34.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 31 | 34.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 32 | 34.30 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 40 | 34.39 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 18 |
| 46 | 34.41 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 70 | 34.62 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 72 | 34.65 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 74 | 34.66 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 86 | 34.70 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 93 | 34.74 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 94 | 34.74 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 110 | 34.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 115 | 34.81 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 130 | 34.85 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 139 | 34.85 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 140 | 34.86 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 142 | 34.86 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 148 | 34.87 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 149 | 34.88 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 150 | 34.88 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 154 | 34.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 161 | 34.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 184 | 34.93 | wind | 9.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 192 | 34.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 208 | 34.98 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 209 | 34.98 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 16 |
| 216 | 34.99 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 239 | 35.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 240 | 35.05 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 246 | 35.06 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 247 | 35.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 284 | 35.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 311 | 35.16 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 312 | 35.16 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 332 | 35.18 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 338 | 35.18 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 356 | 35.21 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 384 | 35.24 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 396 | 35.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 425 | 35.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 440 | 35.31 | temperature | 20.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 453 | 35.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 455 | 35.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 462 | 35.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 465 | 35.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 475 | 35.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 477 | 35.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 499 | 35.36 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 512 | 35.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 531 | 35.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 556 | 35.42 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 560 | 35.42 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 699 | 35.54 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 722 | 35.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 732 | 35.56 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 741 | 35.56 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 757 | 35.58 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 783 | 35.60 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 803 | 35.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 834 | 35.63 | wind | 9.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 838 | 35.63 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 888 | 35.66 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 899 | 35.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 927 | 35.69 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 8 |