Os05g0149800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os05g0149800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.85 | 0.181 | 12.9 | -0.0376 | 0.453 | -0.549 | 0.479 | -0.00398 | 0.116 | 2.75 | 23.2 | 10 | -- | -- |
| 14.84 | 0.181 | 12.9 | -0.0376 | 0.453 | -0.549 | 0.48 | -- | 0.116 | 2.74 | 23.2 | 10 | -- | -- |
| 15.39 | 0.184 | 12.9 | -0.113 | 0.452 | -0.465 | -- | 0.463 | 0.0923 | 2.79 | 24.1 | 13 | -- | -- |
| 15.64 | 0.184 | 12.9 | -0.0487 | 0.455 | -0.554 | -- | -- | 0.113 | 2.76 | 23.17 | 6 | -- | -- |
| 24.09 | 0.229 | 12.9 | -0.241 | -- | -0.383 | -- | 0.692 | 0.0245 | -- | 27.11 | 2581 | -- | -- |
| 18.67 | 0.203 | 12.9 | 0.0743 | 0.381 | -- | 0.502 | -- | 0.191 | 3.11 | -- | -- | -- | -- |
| 19.5 | 0.207 | 12.9 | 0.0637 | 0.384 | -- | -- | -- | 0.188 | 3.16 | -- | -- | -- | -- |
| 24.22 | 0.229 | 12.9 | -0.0943 | -- | -0.432 | -- | -- | 0.0915 | -- | 27.28 | 2579 | -- | -- |
| 15.7 | 0.185 | 12.9 | -- | 0.451 | -0.535 | -- | -- | 0.12 | 2.76 | 23.16 | 6 | -- | -- |
| 27.88 | 0.247 | 12.9 | 0.08 | -- | -- | -- | -- | 0.198 | -- | -- | -- | -- | -- |
| 19.61 | 0.207 | 12.9 | -- | 0.385 | -- | -- | -- | 0.181 | 3.16 | -- | -- | -- | -- |
| 24.43 | 0.23 | 12.9 | -- | -- | -0.387 | -- | -- | 0.103 | -- | 27.4 | 2555 | -- | -- |
| 28.05 | 0.247 | 12.9 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 2 | 13.80 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 15 | 13.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 16 | 13.95 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |
| 19 | 13.95 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 24 | 13.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 40 | 14.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 41 | 14.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 49 | 14.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 65 | 14.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 13 |
| 131 | 14.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 212 | 14.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 229 | 14.37 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 252 | 14.40 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 7 |
| 321 | 14.48 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 333 | 14.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 384 | 14.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 386 | 14.57 | temperature | 20 | 30 | > th | dose independent | sin | 10 | NA |
| 400 | 14.59 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 5 |
| 407 | 14.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 422 | 14.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 435 | 14.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 446 | 14.63 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 8 |
| 547 | 14.73 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 13 |
| 557 | 14.74 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 562 | 14.74 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 12 |
| 630 | 14.79 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 17 |
| 793 | 14.89 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 9 |
| 860 | 14.93 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 14 |
| 877 | 14.94 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 884 | 14.94 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 12 |