Os05g0148700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os05g0148700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.89 | 0.455 | 12.3 | -1.18 | 4.19 | -1.14 | 1.86 | 0.0563 | -0.202 | 8.45 | 52 | 1023 | -- | -- |
| 93.89 | 0.451 | 12.3 | -1.18 | 4.19 | -1.13 | 1.87 | -- | -0.201 | 8.45 | 51.97 | 1021 | -- | -- |
| 102.63 | 0.472 | 12.3 | -1.23 | 4.27 | -1.18 | -- | 1.38 | -0.213 | 8.4 | 49.95 | 957 | -- | -- |
| 104.91 | 0.477 | 12.3 | -1.12 | 4.15 | -1.03 | -- | -- | -0.199 | 8.41 | 51.62 | 1044 | -- | -- |
| 954.47 | 1.44 | 12.4 | -1.15 | -- | -0.861 | -- | 0.404 | -0.168 | -- | 31.49 | 1427 | -- | -- |
| 113.81 | 0.5 | 12.3 | -1.11 | 3.92 | -- | 1.67 | -- | -0.166 | 8.23 | -- | -- | -- | -- |
| 122.36 | 0.518 | 12.3 | -1.06 | 3.92 | -- | -- | -- | -0.168 | 8.2 | -- | -- | -- | -- |
| 642.48 | 1.18 | 12.4 | -0.926 | -- | 3.58 | -- | -- | -0.0679 | -- | -7.452 | 631 | -- | -- |
| 137.5 | 0.546 | 12.3 | -- | 4.22 | -0.983 | -- | -- | -0.0886 | 8.41 | 54.52 | 970 | -- | -- |
| 971.66 | 1.46 | 12.4 | -1.03 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 152.24 | 0.577 | 12.3 | -- | 3.92 | -- | -- | -- | -0.0491 | 8.22 | -- | -- | -- | -- |
| 664.49 | 1.2 | 12.4 | -- | -- | 3.61 | -- | -- | 0.0346 | -- | -7.259 | 638 | -- | -- |
| 999.91 | 1.48 | 12.4 | -- | -- | -- | -- | -- | -0.0077 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 2 | 85.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 17 |
| 3 | 85.59 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 5 | 85.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 14 | 88.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 6 |
| 17 | 88.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 18 | 88.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 21 | 89.40 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 8 |
| 32 | 89.43 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 35 | 89.60 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 40 | 89.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 42 | 89.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 46 | 89.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 6 |
| 48 | 90.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 55 | 90.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 56 | 90.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 6 |
| 57 | 90.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 6 |
| 61 | 90.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 73 | 90.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 6 |
| 74 | 90.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 75 | 90.93 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 79 | 91.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 18 |
| 83 | 91.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 15 |
| 86 | 91.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 6 |
| 91 | 91.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 92 | 91.31 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 99 | 91.39 | radiation | 1.0 | 30 | < th | dose dependent | sin | 17 | NA |
| 105 | 91.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 8 |
| 106 | 91.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 8 |
| 116 | 91.56 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 118 | 91.62 | radiation | 1.0 | 90 | > th | dose independent | sin | 19 | NA |
| 131 | 91.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 141 | 91.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 6 |
| 143 | 91.84 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 152 | 91.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 16 |
| 154 | 91.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 162 | 92.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 180 | 92.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 188 | 92.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 190 | 92.42 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 11 |
| 192 | 92.43 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 194 | 92.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 205 | 92.50 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 213 | 92.57 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 18 |
| 263 | 92.94 | radiation | 1.0 | 90 | < th | dose independent | sin | 18 | NA |
| 264 | 92.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 15 |
| 272 | 93.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 8 |
| 275 | 93.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 279 | 93.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 283 | 93.11 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 292 | 93.13 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 300 | 93.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 313 | 93.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 317 | 93.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 16 |
| 318 | 93.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 322 | 93.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 15 |
| 324 | 93.29 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 327 | 93.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 328 | 93.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 331 | 93.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 335 | 93.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 371 | 93.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 380 | 93.54 | radiation | 40.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 386 | 93.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 391 | 93.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 394 | 93.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 396 | 93.57 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 427 | 93.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 15 |
| 432 | 93.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 438 | 93.71 | humidity | 50.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 455 | 93.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 456 | 93.82 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 476 | 93.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 486 | 93.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 18 |
| 488 | 93.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 18 |
| 494 | 93.99 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 6 |
| 540 | 94.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 560 | 94.28 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 598 | 94.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 5 |
| 607 | 94.47 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 621 | 94.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 23 |
| 622 | 94.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 624 | 94.53 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 18 | 17 |
| 729 | 94.89 | humidity | 70.0 | 10 | < th | dose independent | rect. | 12 | 7 |
| 734 | 94.90 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 767 | 95.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 772 | 95.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 775 | 95.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 779 | 95.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 806 | 95.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 808 | 95.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 18 |
| 819 | 95.18 | humidity | 90.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 904 | 95.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 18 |
| 909 | 95.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 18 |
| 958 | 95.44 | humidity | 70.0 | 720 | > th | dose independent | sin | 14 | NA |