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Os05g0147200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Initiation factor eIF-4 gamma, middle domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.95 (0.0158) R2 : 0.0283
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.121 (0.0332) R2dN8 : 0.0366 R2N8 : 0.0283
σ : 0.297
deviance : 40.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.44 0.263 9.95 0.0777 0.26 -0.27 0.301 -0.322 0.14 18.8 19.2 11 -- --
31.85 0.263 9.95 0.0757 0.263 -0.258 0.209 -- 0.137 18.6 17.69 10 -- --
31.66 0.262 9.95 0.078 0.261 -0.273 -- -0.278 0.143 18.8 19.2 11 -- --
31.95 0.263 9.95 0.0827 0.26 -0.266 -- -- 0.137 18.9 17.71 11 -- --
35.17 0.276 9.95 0.0623 -- -0.253 -- -0.238 0.132 -- 19.2 11 -- --
34.25 0.274 9.95 0.0922 0.319 -- 0.352 -- 0.137 15.8 -- -- -- --
34.62 0.276 9.95 0.0972 0.321 -- -- -- 0.139 15.9 -- -- -- --
35.48 0.277 9.95 0.0567 -- -0.255 -- -- 0.129 -- 20.04 9 -- --
32.11 0.264 9.96 -- 0.261 -0.274 -- -- 0.131 19 17.71 10 -- --
40.3 0.297 9.95 0.0839 -- -- -- -- 0.13 -- -- -- -- --
34.87 0.276 9.95 -- 0.32 -- -- -- 0.128 15.9 -- -- -- --
35.58 0.278 9.95 -- -- -0.255 -- -- 0.125 -- 20.04 9 -- --
40.48 0.297 9.95 -- -- -- -- -- 0.121 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.83 temperature 10.0 270 > th dose dependent rect. 9 1
5 27.11 temperature 10.0 10 > th dose dependent rect. 9 6
7 27.23 temperature 10.0 270 > th dose dependent rect. 7 4
8 27.23 temperature 10.0 90 > th dose dependent rect. 8 6
11 27.26 temperature 10.0 270 > th dose dependent rect. 6 6
17 27.43 temperature 15.0 10 > th dose dependent rect. 9 3
29 27.64 wind 9.0 270 < th dose dependent rect. 7 4
32 27.70 wind 9.0 270 < th dose dependent rect. 8 2
33 27.71 wind 5.0 270 < th dose independent rect. 8 2
35 27.72 wind 7.0 270 < th dose independent rect. 7 15
39 27.76 wind 1.0 270 > th dose independent rect. 12 18
44 27.77 wind 9.0 270 < th dose dependent rect. 6 6
46 27.78 radiation 40.0 90 < th dose independent rect. 13 19
48 27.80 temperature 15.0 270 > th dose independent rect. 9 1
49 27.80 radiation 1.0 270 > th dose independent rect. 9 1
56 27.84 precipitation 0.1 270 < th dose independent rect. 10 22
58 27.84 precipitation 0.1 270 < th dose dependent rect. 10 22
59 27.86 wind 9.0 10 < th dose independent rect. 9 6
62 27.89 wind 5.0 270 < th dose independent rect. 7 4
63 27.89 wind 7.0 270 < th dose independent rect. 6 6
65 27.90 temperature 15.0 90 > th dose independent rect. 8 6
69 27.93 humidity 50.0 270 > th dose independent rect. 9 1
70 27.93 precipitation 0.1 270 < th dose independent rect. 9 1
71 27.93 wind 7.0 90 < th dose independent rect. 8 6
72 27.93 radiation 10.0 10 > th dose independent rect. 9 6
73 27.93 precipitation 0.1 270 < th dose dependent rect. 9 1
75 27.94 temperature 10.0 10 > th dose independent rect. 9 6
77 27.94 atmosphere 995.0 10 > th dose independent rect. 9 6
78 27.94 atmosphere 1015.0 10 < th dose independent rect. 9 6
79 27.94 precipitation 0.1 10 < th dose independent rect. 9 6
80 27.94 precipitation 0.1 90 < th dose independent rect. 23 9
81 27.94 temperature 10.0 10 > th dose independent rect. 15 18
82 27.94 precipitation 0.1 10 < th dose dependent rect. 9 6
83 27.94 precipitation 0.1 90 < th dose dependent rect. 23 9
85 27.95 humidity 90.0 10 < th dose independent rect. 9 6
87 27.95 precipitation 0.1 90 < th dose independent rect. 8 6
93 27.95 precipitation 0.1 90 < th dose dependent rect. 8 6
95 27.96 atmosphere 995.0 270 > th dose independent rect. 9 1
96 27.96 atmosphere 1015.0 270 < th dose independent rect. 9 1
98 27.96 wind 1.0 270 > th dose independent rect. 11 20
99 27.96 temperature 10.0 270 > th dose independent rect. 10 23
102 27.97 precipitation 0.1 10 < th dose independent rect. 15 18
104 27.97 precipitation 0.1 10 < th dose dependent rect. 15 18
107 27.98 precipitation 0.1 270 < th dose independent rect. 12 18
109 27.98 precipitation 0.1 270 < th dose dependent rect. 12 18
117 28.02 atmosphere 995.0 90 > th dose independent rect. 8 6
119 28.02 atmosphere 1015.0 90 < th dose independent rect. 8 6
122 28.02 temperature 10.0 90 > th dose independent rect. 14 18
125 28.02 precipitation 0.1 270 < th dose independent rect. 11 20
130 28.02 precipitation 0.1 270 < th dose dependent rect. 11 20
136 28.05 temperature 15.0 270 > th dose independent rect. 6 6
137 28.05 wind 7.0 90 < th dose independent rect. 23 9
140 28.06 wind 1.0 270 > th dose independent rect. 11 7
145 28.07 temperature 10.0 1440 > th dose independent rect. 10 6
149 28.07 temperature 10.0 1440 > th dose independent rect. 16 18
152 28.08 wind 1.0 270 > th dose independent rect. 9 1
166 28.09 wind 7.0 270 < th dose independent rect. 17 9
180 28.10 radiation 40.0 10 < th dose independent rect. 15 18
182 28.10 radiation 40.0 10 < th dose independent rect. 12 21
186 28.11 temperature 15.0 270 > th dose independent rect. 7 4
191 28.11 wind 9.0 90 < th dose dependent rect. 8 7
194 28.13 temperature 10.0 90 > th dose independent rect. 23 9
195 28.13 temperature 30.0 90 < th dose independent rect. 23 9
196 28.13 humidity 50.0 90 > th dose independent rect. 23 9
198 28.13 atmosphere 995.0 90 > th dose independent rect. 23 9
199 28.13 temperature 10.0 90 > th dose independent rect. 8 15
205 28.14 precipitation 0.1 270 < th dose independent rect. 2 15
207 28.14 precipitation 0.1 270 < th dose dependent rect. 2 15
217 28.16 temperature 10.0 10 > th dose dependent rect. 9 15
227 28.18 radiation 40.0 90 < th dose independent rect. 23 9
228 28.18 wind 9.0 30 < th dose independent rect. 15 18
234 28.21 humidity 50.0 270 > th dose independent rect. 6 6
235 28.21 precipitation 0.1 270 < th dose independent rect. 6 6
237 28.21 wind 7.0 270 < th dose independent rect. 18 17
241 28.21 precipitation 0.1 270 < th dose dependent rect. 6 6
250 28.22 atmosphere 995.0 90 > th dose independent rect. 8 15
255 28.23 humidity 50.0 270 > th dose independent rect. 7 4
258 28.23 atmosphere 995.0 270 > th dose independent rect. 6 6
259 28.23 atmosphere 1015.0 270 < th dose independent rect. 6 6
262 28.23 radiation 10.0 270 < th dose independent rect. 17 9
264 28.23 temperature 10.0 270 > th dose independent rect. 12 18
269 28.24 radiation 1.0 270 > th dose independent rect. 7 4
275 28.25 humidity 50.0 90 > th dose independent rect. 8 6
276 28.25 precipitation 0.1 90 < th dose independent rect. 8 15
278 28.25 precipitation 0.1 90 < th dose dependent rect. 8 15
279 28.26 precipitation 0.1 270 < th dose independent rect. 7 4
280 28.26 precipitation 0.1 270 < th dose dependent rect. 7 4
284 28.28 atmosphere 995.0 270 > th dose independent rect. 7 4
285 28.28 atmosphere 1015.0 270 < th dose independent rect. 7 4
288 28.28 temperature 10.0 270 > th dose independent rect. 11 20
307 28.31 temperature 10.0 270 > th dose dependent rect. 18 18
318 28.33 humidity 50.0 10 > th dose independent rect. 9 6
328 28.35 wind 7.0 30 < th dose independent rect. 9 3
335 28.36 wind 1.0 270 > th dose independent rect. 23 8
336 28.36 humidity 50.0 270 > th dose independent rect. 17 9
353 28.38 temperature 10.0 270 > th dose independent rect. 17 9
357 28.38 wind 7.0 10 < th dose independent rect. 9 15
358 28.38 temperature 10.0 270 > th dose independent rect. 2 15
359 28.38 atmosphere 1015.0 270 < th dose independent rect. 2 15
378 28.40 wind 7.0 90 < th dose independent rect. 8 19
382 28.40 radiation 40.0 270 < th dose dependent rect. 17 9
383 28.40 wind 9.0 90 < th dose dependent rect. 8 15
399 28.43 temperature 20.0 10 > th dose independent rect. 9 3
406 28.43 atmosphere 1015.0 90 < th dose independent rect. 23 9
421 28.45 radiation 1.0 10 > th dose independent rect. 9 3
422 28.45 wind 1.0 10 > th dose independent rect. 9 6
423 28.45 radiation 1.0 270 > th dose independent rect. 6 6
439 28.46 atmosphere 1015.0 90 < th dose independent rect. 8 15
440 28.46 humidity 50.0 270 > th dose independent rect. 18 17
458 28.48 temperature 10.0 270 > th dose independent rect. 11 7
459 28.48 atmosphere 1015.0 270 < th dose independent rect. 11 7
461 28.48 temperature 10.0 270 > th dose independent rect. 18 17
470 28.49 precipitation 0.1 10 < th dose independent rect. 12 21
473 28.49 precipitation 0.1 10 < th dose dependent rect. 12 21
474 28.50 temperature 10.0 10 > th dose independent rect. 9 3
477 28.50 atmosphere 995.0 10 > th dose independent rect. 9 3
478 28.50 atmosphere 1015.0 10 < th dose independent rect. 9 3
479 28.50 precipitation 0.1 10 < th dose independent rect. 9 3
485 28.50 temperature 10.0 10 > th dose independent rect. 12 21
487 28.50 precipitation 0.1 10 < th dose dependent rect. 9 3
490 28.51 atmosphere 995.0 270 > th dose independent rect. 18 17
491 28.51 wind 9.0 270 < th dose independent rect. 12 18
493 28.52 wind 1.0 10 > th dose independent rect. 9 3
510 28.56 precipitation 0.1 10 < th dose independent rect. 24 9
515 28.56 precipitation 0.1 10 < th dose dependent rect. 24 9
531 28.57 atmosphere 1015.0 10 < th dose independent rect. 15 18
560 28.60 precipitation 0.1 270 < th dose independent rect. 11 7
565 28.60 precipitation 0.1 270 < th dose dependent rect. 11 7
582 28.62 atmosphere 1015.0 270 < th dose dependent rect. 9 1
587 28.63 temperature 10.0 1440 > th dose independent rect. 10 3
590 28.63 humidity 90.0 10 < th dose independent rect. 9 3
591 28.63 atmosphere 995.0 1440 > th dose independent rect. 10 3
597 28.63 wind 9.0 270 < th dose independent rect. 11 20
598 28.63 temperature 10.0 1440 > th dose independent rect. 13 21
606 28.64 humidity 50.0 270 > th dose independent rect. 7 15
616 28.66 wind 7.0 10 < th dose independent rect. 24 9
617 28.66 atmosphere 995.0 270 > th dose independent rect. 17 9
627 28.67 atmosphere 995.0 10 > th dose independent rect. 15 18
639 28.68 radiation 40.0 270 < th dose dependent rect. 22 9
647 28.69 radiation 1.0 90 > th dose independent rect. 12 20
651 28.70 humidity 50.0 10 > th dose independent rect. 9 3
657 28.70 wind 1.0 270 > th dose independent rect. 2 15
663 28.70 wind 7.0 270 < th dose independent rect. 6 20
677 28.72 atmosphere 995.0 10 > th dose independent rect. 9 15
682 28.72 radiation 1.0 270 > th dose independent rect. 10 21
689 28.73 precipitation 0.1 10 < th dose independent rect. 9 15
691 28.73 wind 9.0 270 < th dose independent rect. 10 22
696 28.73 precipitation 0.1 10 < th dose dependent rect. 9 15
700 28.74 temperature 10.0 10 > th dose independent rect. 24 9
702 28.74 temperature 30.0 10 < th dose independent rect. 24 9
703 28.74 humidity 50.0 10 > th dose independent rect. 24 9
705 28.74 atmosphere 995.0 10 > th dose independent rect. 24 9
706 28.74 temperature 10.0 10 > th dose independent rect. 9 15
718 28.75 atmosphere 995.0 270 > th dose independent rect. 12 18
730 28.76 precipitation 0.1 270 < th dose independent rect. 17 9
735 28.76 wind 9.0 30 < th dose independent rect. 12 21
736 28.76 precipitation 0.1 270 < th dose dependent rect. 17 9
744 28.77 atmosphere 1015.0 10 < th dose independent rect. 24 9
812 28.81 wind 9.0 270 < th dose independent rect. 2 15
830 28.83 wind 9.0 270 < th dose independent rect. 11 7
846 28.84 wind 7.0 270 < th dose independent rect. 5 22
847 28.84 atmosphere 1015.0 90 < th dose dependent rect. 8 5
850 28.84 temperature 10.0 10 > th dose dependent rect. 9 17
917 28.90 wind 9.0 90 < th dose dependent rect. 8 18
921 28.91 wind 9.0 90 < th dose dependent rect. 23 9
928 28.92 temperature 10.0 10 > th dose dependent rect. 20 19
943 28.93 atmosphere 995.0 270 > th dose independent rect. 11 20
944 28.93 atmosphere 1015.0 10 < th dose independent rect. 12 21
948 28.94 humidity 90.0 270 < th dose independent rect. 9 1
960 28.95 precipitation 0.1 10 < th dose independent rect. 2 7
961 28.95 radiation 40.0 10 < th dose independent rect. 24 9
965 28.95 precipitation 0.1 10 < th dose dependent rect. 2 7
970 28.96 precipitation 0.1 270 < th dose independent rect. 18 17
975 28.96 precipitation 0.1 270 < th dose dependent rect. 18 17