Os05g0146100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0146100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.47 | 0.551 | 5.08 | 1.48 | 0.395 | 1.19 | -0.249 | -0.137 | 0.297 | 3.33 | 9.992 | 1496 | -- | -- |
| 137.06 | 0.545 | 5.08 | 1.48 | 0.381 | 1.22 | -0.297 | -- | 0.271 | 3.28 | 9.998 | 1555 | -- | -- |
| 137.56 | 0.546 | 5.08 | 1.48 | 0.387 | 1.21 | -- | -0.164 | 0.291 | 3.36 | 9.997 | 1505 | -- | -- |
| 136.87 | 0.545 | 5.08 | 1.47 | 0.324 | 1.28 | -- | -- | 0.317 | 3.4 | 9.998 | 1566 | -- | -- |
| 140.81 | 0.553 | 5.04 | 1.75 | -- | 1.28 | -- | -0.264 | 0.401 | -- | 14.51 | 1757 | -- | -- |
| 169.52 | 0.61 | 5.12 | 1.65 | 0.427 | -- | -0.536 | -- | 0.125 | 2.84 | -- | -- | -- | -- |
| 170.49 | 0.611 | 5.12 | 1.66 | 0.426 | -- | -- | -- | 0.128 | 2.93 | -- | -- | -- | -- |
| 136.87 | 0.545 | 5.07 | 1.46 | -- | 1.45 | -- | -- | 0.319 | -- | 9.744 | 1739 | -- | -- |
| 185.05 | 0.634 | 5.08 | -- | 0.331 | 1.52 | -- | -- | 0.318 | 3.41 | 9.905 | 2966 | -- | -- |
| 180.96 | 0.629 | 5.11 | 1.68 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 243.14 | 0.729 | 5.16 | -- | 0.459 | -- | -- | -- | -0.0566 | 2.96 | -- | -- | -- | -- |
| 178.93 | 0.623 | 5.07 | -- | -- | 2.21 | -- | -- | 0.215 | -- | 9.88 | 3293 | -- | -- |
| 255.27 | 0.746 | 5.16 | -- | -- | -- | -- | -- | -0.0469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 2 | 126.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 3 | 127.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 4 | 127.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 49 | 128.98 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 54 | 129.14 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 55 | 129.23 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 63 | 129.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 64 | 129.50 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 73 | 129.70 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 75 | 129.73 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 78 | 129.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 105 | 130.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 110 | 130.19 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 115 | 130.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 121 | 130.29 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 144 | 130.43 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 148 | 130.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 151 | 130.55 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 156 | 130.60 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 166 | 130.72 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 180 | 130.89 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 201 | 131.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 272 | 131.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 275 | 131.46 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 281 | 131.49 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 299 | 131.60 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 317 | 131.69 | temperature | 20.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 401 | 131.96 | temperature | 20.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 403 | 131.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 406 | 131.96 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 12 |
| 416 | 132.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 417 | 132.00 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 10 |
| 439 | 132.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 461 | 132.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 467 | 132.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 471 | 132.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 512 | 132.23 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 541 | 132.28 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 548 | 132.29 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 8 |
| 551 | 132.30 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 581 | 132.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 584 | 132.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 586 | 132.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 587 | 132.36 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 596 | 132.38 | wind | 5.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 598 | 132.38 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 614 | 132.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 667 | 132.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 671 | 132.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 673 | 132.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 701 | 132.52 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 725 | 132.55 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 22 |
| 760 | 132.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 795 | 132.61 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 16 |
| 802 | 132.63 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 870 | 132.70 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 921 | 132.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 922 | 132.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 949 | 132.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 962 | 132.84 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 966 | 132.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 971 | 132.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 981 | 132.87 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |