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Os05g0145000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ring finger protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.67 (0.0213) R2 : 0.00382
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0594 (0.0449) R2dN8 : 0.00493 R2N8 : 0.00382
σ : 0.402
deviance : 74.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.75 0.351 8.72 -0.354 0.433 -0.598 -0.357 1.45 -0.0863 6.39 27.3 4668 -- --
58.4 0.359 8.67 0.128 0.561 -0.311 -0.0407 -- 0.0164 5.11 27.3 4668 -- --
56.07 0.349 8.72 -0.354 0.431 -0.597 -- 1.43 -0.0839 6.34 27.32 4667 -- --
56.64 0.351 8.68 -0.00491 0.424 -0.521 -- -- -0.0474 6.43 26.41 6034 -- --
65.11 0.376 8.73 -0.321 -- -0.61 -- 1.46 -0.0625 -- 27.4 4427 -- --
63.99 0.375 8.66 0.218 0.408 -- -0.345 -- 0.0745 6.4 -- -- -- --
64.28 0.375 8.66 0.213 0.406 -- -- -- 0.0754 6.31 -- -- -- --
64.68 0.375 8.68 0.0782 -- -0.416 -- -- 0.0166 -- 28.9 5765 -- --
56.52 0.35 8.68 -- 0.422 -0.487 -- -- -0.0343 6.38 26.7 6028 -- --
72.85 0.399 8.67 0.224 -- -- -- -- 0.0842 -- -- -- -- --
65.47 0.378 8.66 -- 0.409 -- -- -- 0.0517 6.28 -- -- -- --
64.8 0.375 8.69 -- -- -0.474 -- -- -0.00512 -- 27.81 5757 -- --
74.16 0.402 8.67 -- -- -- -- -- 0.0594 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.22 humidity 90 14400 > th dose dependent rect. 21 2
11 54.98 radiation 1 14400 > th dose independent rect. 18 11
13 55.00 wind 3 43200 < th dose independent rect. 20 2
16 55.02 temperature 20 720 > th dose dependent rect. 21 16
17 55.05 wind 3 43200 > th dose independent rect. 20 2
18 55.06 wind 9 43200 > th dose dependent rect. 10 11
22 55.14 wind 9 43200 > th dose independent rect. 17 22
23 55.14 temperature 20 720 > th dose dependent rect. 21 14
25 55.16 wind 9 43200 > th dose dependent sin 18 NA
29 55.17 wind 9 43200 > th dose dependent rect. 10 14
31 55.18 humidity 90 14400 > th dose independent rect. 21 1
32 55.18 temperature 30 4320 < th dose independent rect. 14 2
34 55.18 wind 9 43200 > th dose dependent rect. 10 17
38 55.20 humidity 90 14400 < th dose independent rect. 18 1
39 55.20 wind 9 43200 < th dose independent rect. 18 21
41 55.20 wind 9 43200 > th dose dependent rect. 10 21
42 55.20 temperature 15 30 > th dose dependent rect. 1 23
43 55.21 wind 9 43200 < th dose independent rect. 20 19
50 55.23 wind 9 43200 > th dose independent rect. 20 19
54 55.25 temperature 20 720 > th dose dependent sin 7 NA
59 55.28 temperature 25 1440 > th dose independent rect. 19 2
67 55.30 wind 9 43200 > th dose dependent rect. 13 19
69 55.32 humidity 90 14400 < th dose independent rect. 21 1
70 55.32 temperature 30 4320 > th dose independent rect. 14 2
75 55.34 wind 9 43200 > th dose independent rect. 13 22
79 55.35 humidity 80 14400 > th dose independent rect. 17 1
84 55.37 wind 9 43200 < th dose independent rect. 13 22
89 55.38 temperature 30 10 < th dose dependent rect. 5 23
94 55.40 wind 9 43200 > th dose independent rect. 23 22
97 55.40 humidity 80 14400 > th dose dependent rect. 18 1
100 55.41 wind 9 43200 > th dose independent rect. 6 15
103 55.41 wind 9 43200 > th dose dependent sin 13 NA
108 55.42 wind 9 43200 < th dose independent rect. 6 9
110 55.42 wind 9 43200 > th dose independent rect. 2 19
123 55.44 wind 9 43200 < th dose independent rect. 2 13
125 55.44 wind 9 43200 > th dose dependent rect. 20 1
136 55.47 radiation 20 4320 > th dose independent rect. 16 16
141 55.47 temperature 10 720 > th dose dependent rect. 21 16
143 55.48 humidity 90 14400 > th dose independent rect. 18 5
146 55.48 wind 9 43200 < th dose independent rect. 23 22
159 55.51 wind 9 43200 < th dose independent rect. 2 19
161 55.52 wind 9 43200 < th dose independent rect. 6 15
166 55.52 temperature 10 720 > th dose dependent rect. 21 18
168 55.53 wind 9 43200 > th dose independent rect. 6 9
173 55.54 humidity 90 14400 < th dose independent rect. 18 5
178 55.54 wind 9 43200 > th dose independent rect. 6 21
186 55.54 wind 7 43200 > th dose dependent rect. 6 15
201 55.56 wind 9 43200 > th dose independent rect. 20 23
206 55.57 wind 9 43200 > th dose independent rect. 20 1
210 55.57 wind 9 43200 > th dose independent rect. 2 13
222 55.57 temperature 15 90 > th dose dependent rect. 6 23
223 55.58 temperature 20 14400 < th dose independent rect. 21 1
235 55.59 wind 9 43200 > th dose independent no NA NA
240 55.59 wind 7 43200 > th dose dependent rect. 6 10
266 55.62 radiation 1 14400 > th dose independent rect. 18 1
278 55.62 wind 9 43200 > th dose dependent rect. 10 5
281 55.63 wind 9 43200 < th dose independent rect. 8 6
289 55.63 wind 7 43200 > th dose dependent rect. 2 19
310 55.65 wind 9 43200 < th dose independent rect. 20 23
314 55.65 temperature 10 720 > th dose dependent rect. 17 20
315 55.65 wind 7 43200 > th dose dependent rect. 23 22
317 55.66 wind 9 43200 < th dose independent sin 2 NA
318 55.66 temperature 25 1440 < th dose independent rect. 19 1
323 55.66 wind 9 43200 < th dose independent rect. 6 21
329 55.66 humidity 90 14400 > th dose dependent sin 17 NA
330 55.66 wind 3 43200 < th dose dependent rect. 8 1
338 55.67 atmosphere 995 43200 < th dose dependent rect. 15 1
340 55.67 temperature 10 720 > th dose dependent rect. 21 21
341 55.68 temperature 20 14400 > th dose independent rect. 20 2
344 55.68 radiation 30 4320 < th dose independent rect. 15 17
345 55.68 wind 9 43200 < th dose independent rect. 6 18
362 55.69 wind 9 43200 < th dose independent rect. 20 1
363 55.69 radiation 20 720 > th dose independent rect. 16 1
385 55.69 wind 9 43200 < th dose independent rect. 2 22
389 55.69 wind 1 43200 > th dose dependent rect. 20 1
394 55.70 wind 9 43200 > th dose independent sin 1 NA
406 55.71 wind 9 43200 < th dose independent no NA NA
421 55.71 wind 7 43200 > th dose dependent sin 2 NA
422 55.71 wind 9 43200 > th dose dependent rect. 17 15
424 55.71 temperature 10 720 > th dose dependent rect. 17 18
426 55.71 temperature 10 720 > th dose dependent rect. 17 22
459 55.74 wind 9 43200 < th dose dependent rect. 20 1
460 55.74 temperature 20 4320 > th dose dependent rect. 19 1
479 55.75 wind 7 43200 > th dose dependent rect. 20 20
481 55.75 temperature 15 270 > th dose dependent rect. 23 23
523 55.78 wind 7 43200 > th dose dependent rect. 18 22
524 55.78 temperature 10 720 > th dose dependent rect. 10 23
530 55.79 temperature 30 1440 < th dose dependent rect. 18 1
548 55.80 temperature 20 4320 > th dose dependent rect. 10 1
566 55.81 radiation 1 14400 > th dose independent rect. 4 2
567 55.81 temperature 30 720 > th dose independent rect. 14 3
597 55.81 temperature 10 720 > th dose dependent rect. 23 16
598 55.81 radiation 20 4320 > th dose dependent rect. 15 17
634 55.83 temperature 15 30 > th dose dependent rect. 3 23
645 55.84 wind 9 43200 > th dose dependent rect. 20 4
682 55.86 radiation 1 14400 < th dose independent rect. 19 11
689 55.86 temperature 10 270 > th dose dependent no NA NA
698 55.86 temperature 10 720 > th dose dependent rect. 17 16
700 55.86 wind 7 43200 > th dose dependent rect. 23 19
709 55.87 radiation 1 14400 < th dose independent rect. 3 3
710 55.87 radiation 1 14400 < th dose independent rect. 1 5
711 55.87 radiation 1 14400 < th dose independent rect. 23 7
724 55.87 temperature 10 720 > th dose dependent rect. 23 19
725 55.87 humidity 90 14400 > th dose dependent rect. 5 19
733 55.88 temperature 30 720 < th dose independent rect. 15 2
759 55.88 temperature 20 4320 > th dose dependent rect. 7 22
762 55.88 temperature 10 720 > th dose dependent rect. 12 23
785 55.89 temperature 20 4320 > th dose dependent rect. 18 21
806 55.90 temperature 20 4320 > th dose dependent rect. 7 15
820 55.90 temperature 15 720 > th dose dependent rect. 14 23
829 55.91 wind 7 43200 > th dose dependent no NA NA
866 55.92 temperature 20 4320 > th dose dependent rect. 1 14
875 55.92 temperature 20 4320 > th dose dependent rect. 1 21
909 55.93 temperature 20 4320 > th dose dependent rect. 3 19
919 55.94 atmosphere 995 43200 < th dose independent rect. 14 2
967 55.95 humidity 80 43200 > th dose independent rect. 2 1
977 55.95 temperature 20 4320 > th dose dependent no NA NA