Os05g0119600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0119600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.72 | 0.787 | 4.25 | -3.6 | 0.471 | 0.861 | -1.82 | -5.29 | -0.884 | 7.11 | 21.44 | 1980 | -- | -- |
| 295.89 | 0.801 | 4.1 | -2.32 | 0.39 | 0.823 | -1.53 | -- | -0.57 | 7.01 | -3.893 | 7779 | -- | -- |
| 288.51 | 0.791 | 4.22 | -3.35 | 0.396 | 0.747 | -- | -4.17 | -0.81 | 6.86 | 20.04 | 1616 | -- | -- |
| 301.71 | 0.809 | 4.09 | -2.35 | 0.379 | 0.83 | -- | -- | -0.572 | 7.12 | 10.11 | 7795 | -- | -- |
| 295.73 | 0.801 | 4.23 | -3.35 | -- | 0.746 | -- | -4.08 | -0.798 | -- | 19.79 | 1446 | -- | -- |
| 306.99 | 0.821 | 4.05 | -1.9 | 0.373 | -- | -1.51 | -- | -0.347 | 6.88 | -- | -- | -- | -- |
| 312.84 | 0.828 | 4.04 | -1.93 | 0.368 | -- | -- | -- | -0.343 | 6.85 | -- | -- | -- | -- |
| 308.61 | 0.818 | 4.11 | -2.36 | -- | 0.829 | -- | -- | -0.582 | -- | 8.086 | 8530 | -- | -- |
| 352.47 | 0.874 | 3.91 | -- | 0.364 | -1.23 | -- | -- | 0.24 | 6.66 | 5.895 | 47520 | -- | -- |
| 319.95 | 0.836 | 4.05 | -1.92 | -- | -- | -- | -- | -0.336 | -- | -- | -- | -- | -- |
| 411.01 | 0.948 | 4 | -- | 0.347 | -- | -- | -- | -0.128 | 7.19 | -- | -- | -- | -- |
| 346.07 | 0.866 | 3.91 | -- | -- | -1.22 | -- | -- | 0.151 | -- | 32.96 | 47520 | -- | -- |
| 417.39 | 0.954 | 4 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.54 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 3 | 276.59 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 5 | 276.83 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 8 | 276.86 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 10 | 276.89 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 21 | 276.97 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 18 |
| 25 | 276.98 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 18 |
| 35 | 277.00 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 43 | 277.01 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 21 |
| 44 | 277.02 | temperature | 25.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 53 | 277.03 | temperature | 25.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 55 | 277.03 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 14 |
| 87 | 277.06 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 134 | 277.10 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 136 | 277.11 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 191 | 277.16 | temperature | 25.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 193 | 277.16 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 217 | 277.18 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 11 |
| 227 | 277.19 | temperature | 25.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 244 | 277.20 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 273 | 277.21 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 306 | 277.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 369 | 277.28 | temperature | 25.0 | 43200 | > th | dose independent | no | NA | NA |
| 380 | 277.29 | temperature | 25.0 | 43200 | < th | dose independent | no | NA | NA |
| 424 | 277.33 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 453 | 277.37 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 463 | 277.39 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 470 | 277.40 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 475 | 277.41 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 577 | 277.51 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 589 | 277.52 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 693 | 277.63 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 824 | 277.80 | temperature | 20.0 | 43200 | > th | dose dependent | no | NA | NA |
| 828 | 277.80 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 830 | 277.80 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 831 | 277.81 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 852 | 277.82 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 21 | 23 |
| 855 | 277.83 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 906 | 277.87 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 945 | 277.90 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |