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Os05g0115700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to UDP-galactose transporter related protein-like.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0159) R2 : 0.16
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.313 (0.0335) R2dN8 : 0.207 R2N8 : 0.16
σ : 0.3
deviance : 41.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.18 0.206 10.7 0.119 0.531 -0.116 -0.32 -2.41 0.295 22.6 30.05 797 -- --
19.71 0.207 10.6 0.368 0.525 -0.325 -0.362 -- 0.327 22.8 30.22 829 -- --
19.56 0.206 10.7 0.0728 0.53 -0.0834 -- -2.78 0.286 22.7 29.89 812 -- --
20.09 0.209 10.7 0.423 0.538 -0.395 -- -- 0.305 22.6 30.3 783 -- --
34.71 0.274 10.7 -0.0814 -- 0.0553 -- -2.35 0.277 -- 29.22 2078 -- --
23.21 0.226 10.6 0.336 0.466 -- -0.46 -- 0.348 23 -- -- -- --
24.09 0.23 10.6 0.354 0.468 -- -- -- 0.349 23.1 -- -- -- --
35.2 0.278 10.6 0.402 -- -0.208 -- -- 0.365 -- 29.22 2078 -- --
24.66 0.231 10.7 -- 0.526 -0.325 -- -- 0.278 22.6 30.5 755 -- --
37.73 0.287 10.6 0.365 -- -- -- -- 0.353 -- -- -- -- --
27.39 0.245 10.6 -- 0.471 -- -- -- 0.31 23.2 -- -- -- --
39.4 0.293 10.6 -- -- -0.176 -- -- 0.319 -- 29.23 5909 -- --
41.24 0.3 10.6 -- -- -- -- -- 0.313 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.99 humidity 70.0 1440 < th dose dependent rect. 12 1
2 19.02 humidity 60.0 4320 > th dose independent rect. 11 2
3 19.08 temperature 30.0 720 > th dose independent rect. 11 6
5 19.10 temperature 30.0 720 > th dose independent rect. 12 3
8 19.11 humidity 60.0 720 < th dose independent rect. 12 3
9 19.12 wind 1.0 14400 < th dose independent rect. 2 4
14 19.18 wind 1.0 14400 > th dose independent rect. 2 4
19 19.18 temperature 30.0 720 < th dose independent rect. 9 19
35 19.19 temperature 30.0 720 < th dose independent rect. 7 21
37 19.20 temperature 30.0 720 > th dose independent sin 22 NA
39 19.20 humidity 60.0 720 < th dose independent rect. 12 1
79 19.25 humidity 70.0 1440 > th dose independent rect. 17 1
112 19.27 temperature 30.0 720 > th dose independent no NA NA
208 19.28 humidity 60.0 4320 < th dose independent rect. 12 1
210 19.28 temperature 30.0 720 > th dose independent rect. 16 23
211 19.28 temperature 30.0 720 < th dose independent rect. 14 23
217 19.30 temperature 30.0 720 < th dose independent no NA NA
222 19.30 temperature 30.0 720 < th dose independent rect. 10 23
224 19.31 temperature 30.0 720 < th dose independent rect. 10 13
229 19.32 temperature 30.0 720 < th dose independent rect. 9 16
232 19.32 temperature 30.0 720 < th dose independent rect. 16 23
239 19.34 temperature 30.0 720 < th dose independent sin 19 NA
246 19.34 temperature 30.0 720 < th dose independent rect. 24 21
274 19.37 temperature 30.0 720 < th dose independent rect. 9 10
290 19.37 temperature 30.0 720 > th dose dependent rect. 12 3
294 19.38 temperature 30.0 720 < th dose independent rect. 19 23
315 19.40 humidity 70.0 720 > th dose independent rect. 16 3
316 19.40 temperature 30.0 720 < th dose independent rect. 24 19
319 19.40 temperature 30.0 720 < th dose independent rect. 24 23
321 19.41 temperature 30.0 720 < th dose independent rect. 11 11
322 19.41 temperature 30.0 720 < th dose independent rect. 7 14
330 19.43 temperature 30.0 720 < th dose independent rect. 3 23
335 19.44 humidity 60.0 720 > th dose independent rect. 9 19
338 19.44 temperature 30.0 720 > th dose dependent rect. 12 1
341 19.45 humidity 70.0 1440 < th dose independent rect. 16 2
346 19.46 temperature 30.0 720 > th dose independent rect. 15 1
363 19.48 temperature 30.0 720 < th dose independent rect. 22 23
367 19.49 temperature 30.0 720 < th dose independent rect. 14 14
402 19.50 humidity 60.0 720 > th dose independent rect. 11 17
413 19.51 wind 1.0 14400 < th dose independent rect. 5 1
445 19.54 temperature 30.0 720 < th dose independent rect. 14 7
449 19.54 precipitation 0.1 43200 > th dose dependent rect. 15 6
453 19.55 humidity 60.0 720 > th dose independent rect. 24 21
455 19.56 humidity 70.0 720 > th dose independent rect. 16 5
467 19.57 temperature 30.0 720 > th dose dependent sin 2 NA
484 19.59 humidity 60.0 720 > th dose independent rect. 9 10
490 19.59 wind 1.0 14400 < th dose dependent rect. 2 4
520 19.61 precipitation 0.1 43200 > th dose dependent rect. 13 8
540 19.62 precipitation 0.1 43200 > th dose dependent rect. 20 1
545 19.63 humidity 60.0 720 > th dose independent rect. 9 12
546 19.63 humidity 60.0 720 > th dose independent rect. 7 14
548 19.63 humidity 60.0 720 > th dose independent rect. 24 19
591 19.66 humidity 60.0 720 > th dose independent rect. 24 15
592 19.66 humidity 70.0 1440 > th dose independent rect. 16 17
593 19.66 precipitation 0.1 14400 < th dose independent rect. 6 17
597 19.66 humidity 70.0 1440 > th dose independent rect. 16 21
603 19.66 precipitation 0.1 43200 > th dose dependent rect. 13 5
604 19.66 precipitation 0.1 14400 < th dose dependent rect. 6 17
611 19.67 precipitation 0.1 14400 < th dose independent rect. 8 15
613 19.67 precipitation 0.1 14400 > th dose independent rect. 8 16
616 19.67 precipitation 0.1 14400 > th dose independent rect. 6 17
620 19.67 precipitation 0.1 14400 < th dose dependent rect. 8 15
624 19.68 humidity 60.0 720 > th dose independent rect. 11 8
625 19.68 humidity 60.0 720 > th dose independent rect. 11 10
647 19.69 humidity 60.0 720 > th dose independent rect. 9 8
695 19.70 humidity 70.0 1440 < th dose independent rect. 16 22
708 19.71 humidity 70.0 720 > th dose independent rect. 16 12
716 19.71 humidity 70.0 720 < th dose dependent rect. 12 5
736 19.72 temperature 30.0 4320 < th dose independent rect. 14 1
747 19.72 humidity 60.0 4320 > th dose independent rect. 19 19
755 19.72 temperature 30.0 720 > th dose dependent no NA NA
915 19.74 wind 1.0 14400 < th dose independent rect. 2 8
971 19.77 precipitation 0.1 43200 < th dose independent rect. 17 4
992 19.77 precipitation 0.1 43200 < th dose dependent rect. 17 4
996 19.78 precipitation 0.1 43200 < th dose independent rect. 16 2
998 19.78 precipitation 0.1 43200 > th dose independent rect. 17 4