Os05g0110800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0110800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.13 | 0.379 | 9.96 | -1.24 | 2.79 | -8.19 | -1.11 | 26.3 | -0.473 | 9.56 | 0.0255 | 251 | -- | -- |
| 71.93 | 0.395 | 10 | -1.48 | 2.77 | -1.14 | -1.03 | -- | -0.466 | 9.55 | -6.164 | 125 | -- | -- |
| 69.19 | 0.387 | 9.96 | -1.28 | 2.79 | -8.26 | -- | 27.3 | -0.472 | 9.52 | 0.04053 | 174 | -- | -- |
| 74.85 | 0.403 | 10 | -1.5 | 2.76 | -0.912 | -- | -- | -0.451 | 9.54 | -5.388 | 180 | -- | -- |
| 517.67 | 1.06 | 10.1 | -1.22 | -- | -8.47 | -- | 24.3 | -0.453 | -- | 0.6413 | 179 | -- | -- |
| 74.17 | 0.404 | 10 | -1.51 | 2.78 | -- | -0.908 | -- | -0.439 | 9.54 | -- | -- | -- | -- |
| 77.22 | 0.412 | 10 | -1.54 | 2.79 | -- | -- | -- | -0.441 | 9.52 | -- | -- | -- | -- |
| 518.63 | 1.06 | 10.1 | -1.29 | -- | -1.93 | -- | -- | -0.437 | -- | -3.994 | 377 | -- | -- |
| 121.3 | 0.513 | 10 | -- | 2.77 | -1.1 | -- | -- | -0.36 | 9.51 | -5.15 | 2220 | -- | -- |
| 535.31 | 1.08 | 10.1 | -1.56 | -- | -- | -- | -- | -0.434 | -- | -- | -- | -- | -- |
| 140.08 | 0.554 | 10 | -- | 2.79 | -- | -- | -- | -0.269 | 9.56 | -- | -- | -- | -- |
| 560.5 | 1.1 | 10.1 | -- | -- | -1.38 | -- | -- | -0.411 | -- | 1.177 | 1978 | -- | -- |
| 599.84 | 1.14 | 10.1 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.10 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 22 |
| 4 | 64.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 10 | 64.40 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 18 |
| 14 | 64.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 22 |
| 17 | 64.53 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 18 |
| 57 | 64.94 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 19 |
| 59 | 64.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 23 |
| 60 | 64.99 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 13 |
| 61 | 64.99 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 21 |
| 62 | 65.00 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 67 | 65.02 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 23 |
| 90 | 65.14 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 21 |
| 93 | 65.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 22 |
| 96 | 65.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 22 |
| 108 | 65.22 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 127 | 65.28 | precipitation | 0.1 | 270 | > th | dose independent | no | NA | NA |
| 128 | 65.28 | precipitation | 0.1 | 270 | < th | dose independent | no | NA | NA |
| 134 | 65.28 | precipitation | 0.1 | 270 | < th | dose dependent | no | NA | NA |
| 153 | 65.35 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 11 | NA |
| 177 | 65.50 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 12 |
| 179 | 65.51 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 183 | 65.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 187 | 65.59 | precipitation | 0.1 | 270 | > th | dose independent | sin | 11 | NA |
| 193 | 65.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 211 | 65.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 241 | 65.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 16 |
| 248 | 65.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 253 | 65.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 260 | 66.00 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 2 | NA |
| 276 | 66.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 311 | 66.37 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 320 | 66.44 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 340 | 66.60 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 357 | 66.71 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 358 | 66.74 | precipitation | 0.1 | 270 | < th | dose independent | sin | 5 | NA |
| 362 | 66.74 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 5 | NA |
| 378 | 66.83 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 380 | 66.84 | precipitation | 0.1 | 90 | > th | dose independent | sin | 2 | NA |
| 385 | 66.86 | humidity | 90.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 391 | 66.89 | precipitation | 0.1 | 270 | < th | dose independent | sin | 2 | NA |
| 395 | 66.89 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 2 | NA |
| 398 | 66.90 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 16 |
| 414 | 66.94 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 426 | 66.99 | humidity | 90.0 | 10 | < th | dose independent | sin | 0 | NA |
| 436 | 67.00 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 440 | 67.01 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 454 | 67.06 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 464 | 67.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 472 | 67.12 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 481 | 67.15 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 9 |
| 488 | 67.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 493 | 67.17 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 501 | 67.18 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 509 | 67.20 | radiation | 1.0 | 30 | > th | dose independent | sin | 23 | NA |
| 548 | 67.29 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 560 | 67.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 564 | 67.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 577 | 67.39 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 585 | 67.41 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 16 | 17 |
| 589 | 67.42 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 600 | 67.44 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 608 | 67.46 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 7 |
| 625 | 67.52 | humidity | 90.0 | 10 | > th | dose independent | sin | 3 | NA |
| 626 | 67.52 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 639 | 67.54 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 12 |
| 661 | 67.59 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 664 | 67.60 | precipitation | 0.1 | 270 | < th | dose independent | sin | 17 | NA |
| 668 | 67.60 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 17 | NA |
| 669 | 67.60 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 675 | 67.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 692 | 67.65 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 715 | 67.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 716 | 67.69 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 721 | 67.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 22 |
| 726 | 67.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 738 | 67.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 14 |
| 744 | 67.73 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 16 | 17 |
| 745 | 67.73 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 754 | 67.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 758 | 67.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 760 | 67.76 | wind | 5.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 761 | 67.76 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 9 |
| 773 | 67.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 786 | 67.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 793 | 67.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 18 |
| 796 | 67.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 804 | 67.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 851 | 67.83 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 857 | 67.84 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 14 |
| 866 | 67.85 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 19 |
| 881 | 67.88 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 886 | 67.88 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 22 |
| 891 | 67.88 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 896 | 67.89 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 901 | 67.89 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 921 | 67.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 930 | 67.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 936 | 67.93 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 13 |
| 946 | 67.94 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 11 |
| 953 | 67.94 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 958 | 67.95 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 967 | 67.97 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 968 | 67.97 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 10 |
| 971 | 67.97 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 989 | 67.98 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 11 |