Os05g0106900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0106900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.85 | 0.367 | 6.64 | -1.15 | 0.179 | -2.63 | -0.951 | 2.31 | -0.528 | 0.388 | 29.5 | 11 | -- | -- |
| 65.19 | 0.376 | 6.6 | -0.747 | 0.233 | -2.71 | -0.0213 | -- | -0.455 | 2.49 | 28.56 | 11 | -- | -- |
| 63.06 | 0.37 | 6.63 | -1.03 | 0.264 | -2.69 | -- | 1.85 | -0.511 | 2.64 | 29.5 | 22 | -- | -- |
| 65.19 | 0.376 | 6.6 | -0.751 | 0.233 | -2.72 | -- | -- | -0.458 | 2.45 | 28.58 | 11 | -- | -- |
| 65.07 | 0.376 | 6.62 | -0.969 | -- | -2.49 | -- | 1.42 | -0.482 | -- | 28.58 | 33 | -- | -- |
| 168.69 | 0.609 | 6.47 | -0.101 | 0.654 | -- | 0.366 | -- | 0.109 | 13.9 | -- | -- | -- | -- |
| 169.19 | 0.609 | 6.47 | -0.0901 | 0.656 | -- | -- | -- | 0.112 | 14 | -- | -- | -- | -- |
| 67.19 | 0.382 | 6.6 | -0.709 | -- | -2.54 | -- | -- | -0.433 | -- | 28.08 | 33 | -- | -- |
| 78.61 | 0.413 | 6.57 | -- | 0.113 | -2.41 | -- | -- | -0.317 | 2.02 | 28.5 | 5 | -- | -- |
| 195.02 | 0.653 | 6.48 | -0.117 | -- | -- | -- | -- | 0.0962 | -- | -- | -- | -- | -- |
| 169.4 | 0.609 | 6.47 | -- | 0.658 | -- | -- | -- | 0.122 | 14 | -- | -- | -- | -- |
| 79.13 | 0.414 | 6.57 | -- | -- | -2.31 | -- | -- | -0.299 | -- | 28.38 | 5 | -- | -- |
| 195.38 | 0.652 | 6.47 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 2 | 60.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 4 | 61.18 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 5 | 61.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 62.15 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 10 | 62.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 13 | 63.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 14 | 64.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 16 | 64.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 21 | 65.06 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 22 | 65.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 25 | 65.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 37 | 67.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 38 | 67.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 41 | 67.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 44 | 68.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 111 | 70.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 113 | 70.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 129 | 70.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 219 | 72.57 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 248 | 72.83 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 470 | 74.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 525 | 74.37 | temperature | 30 | 1440 | < th | dose dependent | sin | 4 | NA |
| 624 | 74.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 663 | 74.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 664 | 74.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 684 | 74.83 | temperature | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 718 | 74.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 870 | 75.24 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |