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Os04g0691700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Autoimmune regulator (Autoimmune polyendocrinopathy candidiasis ectodermal dystrophy protein) (APECED protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.99 (0.0138) R2 : 0.124
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.233 (0.029) R2dN8 : 0.161 R2N8 : 0.124
σ : 0.259
deviance : 30.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.05 0.23 9.89 0.844 0.183 -0.422 0.327 2.69 0.457 4.27 24.34 1620 -- --
26.84 0.241 9.97 0.145 0.213 -0.197 0.324 -- 0.312 4.28 22.39 9006 -- --
24.34 0.23 9.9 0.833 0.188 -0.406 -- 2.59 0.456 4.17 24.04 1593 -- --
27.11 0.243 9.97 0.302 0.235 -0.294 -- -- 0.344 4.32 7.579 18636 -- --
26.08 0.238 9.89 0.883 -- -0.415 -- 2.64 0.497 -- 22.77 1756 -- --
28.08 0.248 9.99 0.0492 0.208 -- 0.305 -- 0.235 4.44 -- -- -- --
28.34 0.249 9.99 0.0469 0.21 -- -- -- 0.234 4.47 -- -- -- --
28.34 0.249 9.98 0.109 -- -0.307 -- -- 0.283 -- 22.77 1756 -- --
27.76 0.245 9.98 -- 0.245 -0.141 -- -- 0.264 4.62 19.4 10259 -- --
30.7 0.259 9.99 0.0551 -- -- -- -- 0.239 -- -- -- -- --
28.39 0.249 9.99 -- 0.211 -- -- -- 0.228 4.46 -- -- -- --
28.31 0.249 9.99 -- -- -0.335 -- -- 0.238 -- 26.06 1866 -- --
30.78 0.259 9.99 -- -- -- -- -- 0.233 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.63 precipitation 0.1 43200 > th dose dependent rect. 19 1
2 21.76 wind 3.0 43200 < th dose dependent rect. 11 1
3 22.06 precipitation 0.1 43200 > th dose independent rect. 19 1
4 22.16 precipitation 0.1 43200 < th dose independent rect. 19 1
5 22.16 precipitation 0.1 43200 < th dose dependent rect. 19 1
6 22.21 wind 3.0 43200 > th dose independent rect. 11 3
7 22.22 wind 1.0 43200 > th dose independent rect. 8 4
8 22.38 humidity 90.0 43200 > th dose dependent rect. 5 1
9 22.41 wind 3.0 43200 < th dose independent rect. 11 3
10 22.42 wind 1.0 43200 < th dose dependent rect. 19 7
11 22.44 wind 3.0 43200 > th dose independent rect. 12 1
12 22.45 humidity 90.0 43200 < th dose independent rect. 22 2
14 22.46 humidity 90.0 43200 < th dose independent rect. 13 13
15 22.46 humidity 90.0 43200 > th dose dependent rect. 4 3
16 22.47 wind 5.0 43200 < th dose dependent rect. 11 3
27 22.52 humidity 90.0 43200 < th dose independent rect. 18 7
29 22.52 humidity 90.0 43200 < th dose independent rect. 11 20
33 22.52 wind 1.0 43200 < th dose dependent rect. 21 5
34 22.53 wind 1.0 43200 > th dose independent rect. 24 2
40 22.54 temperature 20.0 1440 > th dose dependent rect. 20 9
43 22.55 wind 1.0 43200 < th dose independent rect. 19 7
49 22.56 humidity 90.0 43200 < th dose independent sin 16 NA
52 22.56 humidity 90.0 43200 < th dose dependent rect. 3 1
54 22.57 humidity 90.0 43200 > th dose independent rect. 22 2
64 22.58 humidity 90.0 43200 > th dose independent rect. 19 6
66 22.58 humidity 90.0 43200 < th dose independent rect. 19 21
84 22.60 temperature 20.0 1440 > th dose dependent rect. 4 1
89 22.61 humidity 90.0 43200 > th dose independent rect. 11 20
114 22.63 humidity 90.0 43200 < th dose independent no NA NA
125 22.63 humidity 90.0 43200 < th dose independent rect. 4 23
148 22.65 humidity 90.0 43200 > th dose independent rect. 15 11
164 22.65 humidity 80.0 43200 > th dose dependent rect. 5 21
166 22.66 wind 1.0 43200 < th dose independent rect. 23 3
170 22.66 humidity 90.0 43200 > th dose independent rect. 22 17
214 22.68 humidity 90.0 43200 > th dose dependent rect. 24 15
219 22.69 humidity 80.0 43200 < th dose independent rect. 23 10
231 22.69 temperature 20.0 1440 > th dose dependent rect. 21 1
232 22.69 humidity 80.0 43200 < th dose dependent rect. 23 1
262 22.71 humidity 90.0 43200 > th dose independent rect. 11 16
268 22.71 humidity 90.0 43200 > th dose independent rect. 15 18
283 22.71 humidity 80.0 43200 < th dose dependent rect. 20 7
289 22.71 humidity 80.0 43200 > th dose dependent rect. 1 20
294 22.72 wind 1.0 43200 < th dose independent rect. 8 4
296 22.72 humidity 90.0 43200 > th dose independent rect. 17 17
319 22.73 humidity 90.0 43200 > th dose independent sin 16 NA
320 22.73 humidity 90.0 43200 > th dose independent rect. 5 1
354 22.74 wind 1.0 43200 < th dose independent rect. 21 5
396 22.75 humidity 90.0 43200 > th dose dependent sin 6 NA
398 22.75 wind 1.0 43200 < th dose dependent rect. 23 3
400 22.75 wind 3.0 43200 < th dose dependent rect. 9 4
405 22.76 humidity 90.0 43200 > th dose independent no NA NA
414 22.76 humidity 90.0 43200 > th dose independent rect. 5 23
453 22.78 humidity 90.0 43200 > th dose independent sin 6 NA
474 22.79 wind 1.0 43200 > th dose independent rect. 19 1
501 22.80 humidity 80.0 43200 < th dose independent rect. 20 13
510 22.80 radiation 40.0 43200 > th dose dependent rect. 11 1
522 22.81 humidity 90.0 43200 < th dose independent sin 5 NA
523 22.81 radiation 40.0 43200 > th dose independent rect. 11 1
539 22.81 humidity 90.0 43200 > th dose dependent rect. 11 20
543 22.82 wind 5.0 43200 < th dose independent rect. 15 1
566 22.83 humidity 80.0 43200 > th dose dependent sin 3 NA
567 22.83 temperature 25.0 1440 > th dose dependent rect. 17 1
586 22.84 temperature 25.0 1440 < th dose independent rect. 17 7
604 22.84 humidity 80.0 43200 > th dose dependent rect. 9 17
611 22.85 humidity 80.0 43200 > th dose dependent sin 18 NA
613 22.85 temperature 25.0 1440 > th dose dependent rect. 16 3
615 22.85 wind 1.0 43200 > th dose dependent rect. 11 5
616 22.85 wind 7.0 43200 < th dose dependent rect. 11 5
630 22.86 wind 3.0 43200 > th dose independent rect. 8 8
653 22.86 humidity 90.0 43200 > th dose dependent rect. 16 16
666 22.87 wind 3.0 43200 > th dose independent rect. 6 11
685 22.87 humidity 90.0 43200 > th dose dependent rect. 19 13
686 22.87 humidity 80.0 43200 > th dose dependent rect. 11 14
696 22.88 temperature 25.0 1440 < th dose independent rect. 20 2
697 22.88 wind 3.0 43200 < th dose independent rect. 8 8
708 22.88 wind 1.0 43200 < th dose dependent rect. 21 1
709 22.88 wind 1.0 43200 < th dose dependent rect. 24 1
716 22.88 humidity 80.0 43200 > th dose dependent rect. 3 12
734 22.89 wind 5.0 43200 > th dose independent rect. 15 1
742 22.89 wind 3.0 43200 > th dose dependent rect. 15 1
766 22.90 wind 3.0 43200 < th dose independent rect. 6 11
774 22.90 humidity 80.0 43200 > th dose dependent rect. 16 8
793 22.91 wind 1.0 43200 < th dose independent rect. 19 1
797 22.91 humidity 80.0 43200 > th dose independent rect. 20 11
815 22.91 humidity 80.0 43200 > th dose dependent rect. 13 11
858 22.93 humidity 80.0 43200 > th dose dependent rect. 17 6
873 22.94 humidity 80.0 43200 > th dose independent rect. 24 9
880 22.94 humidity 90.0 43200 > th dose dependent no NA NA
881 22.94 radiation 1.0 43200 > th dose dependent rect. 11 1
939 22.97 wind 1.0 43200 > th dose independent rect. 19 7
984 22.99 wind 3.0 43200 > th dose independent sin 0 NA
987 22.99 radiation 10.0 43200 > th dose independent rect. 10 1