Os04g0691200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os04g0691200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 426.78 | 0.971 | 5.33 | 0.502 | 0.642 | 1.5 | -0.242 | 3.62 | -0.943 | 12.9 | 20.5 | 2651 | -- | -- |
| 458.18 | 0.997 | 5.45 | 0.129 | 0.544 | 1.13 | -0.516 | -- | -1.03 | 12.5 | 24.7 | 3291 | -- | -- |
| 426.96 | 0.962 | 5.33 | 0.498 | 0.647 | 1.5 | -- | 3.62 | -0.943 | 12.8 | 20.57 | 2617 | -- | -- |
| 450.65 | 0.989 | 5.51 | -0.241 | 0.56 | 1.1 | -- | -- | -1.24 | 11.6 | 21.41 | 2578 | -- | -- |
| 451.92 | 0.99 | 5.33 | 0.526 | -- | 1.44 | -- | 3.75 | -0.93 | -- | 20.59 | 2785 | -- | -- |
| 473.09 | 1.02 | 5.4 | 0.335 | 0.569 | -- | -0.422 | -- | -0.835 | 12.9 | -- | -- | -- | -- |
| 473.8 | 1.02 | 5.4 | 0.319 | 0.57 | -- | -- | -- | -0.838 | 12.7 | -- | -- | -- | -- |
| 472.57 | 1.01 | 5.47 | -0.158 | -- | 0.889 | -- | -- | -1.13 | -- | 21.54 | 2794 | -- | -- |
| 448.27 | 0.986 | 5.48 | -- | 0.655 | 0.908 | -- | -- | -1.13 | 12.6 | 21.8 | 2510 | -- | -- |
| 494.1 | 1.04 | 5.41 | 0.299 | -- | -- | -- | -- | -0.848 | -- | -- | -- | -- | -- |
| 476.48 | 1.02 | 5.41 | -- | 0.565 | -- | -- | -- | -0.873 | 12.7 | -- | -- | -- | -- |
| 473.12 | 1.01 | 5.47 | -- | -- | 0.828 | -- | -- | -1.1 | -- | 21.6 | 2790 | -- | -- |
| 496.46 | 1.04 | 5.42 | -- | -- | -- | -- | -- | -0.881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 420.45 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 4 | 421.52 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 18 | 425.27 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 44 | 426.84 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 45 | 427.02 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 48 | 427.11 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 50 | 427.13 | temperature | 20.0 | 4320 | > th | dose independent | sin | 17 | NA |
| 52 | 427.14 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 98 | 427.79 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 122 | 428.12 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 141 | 428.49 | temperature | 20.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 181 | 429.04 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 221 | 429.54 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 333 | 430.97 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 370 | 431.36 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 387 | 431.56 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 388 | 431.56 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 413 | 431.71 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 439 | 431.85 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 447 | 431.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 533 | 432.51 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 535 | 432.53 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 576 | 432.78 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 11 |
| 592 | 432.95 | radiation | 20.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 595 | 432.97 | temperature | 25.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 612 | 433.02 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 673 | 433.29 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 721 | 433.57 | temperature | 25.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 753 | 433.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 755 | 433.72 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 761 | 433.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 762 | 433.76 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 802 | 433.95 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 828 | 434.08 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 829 | 434.09 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 830 | 434.09 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 932 | 434.57 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 964 | 434.69 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 966 | 434.70 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 982 | 434.75 | temperature | 25.0 | 270 | > th | dose dependent | sin | 4 | NA |