Os04g0681900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-CoA binding protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0681900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Acyl-CoA binding protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.9 | 0.21 | 12.7 | 0.745 | 0.57 | 0.451 | 0.141 | -0.0345 | 0.482 | 20.7 | 71 | 1300 | -- | -- |
| 19.91 | 0.208 | 12.7 | 0.739 | 0.57 | 0.449 | 0.144 | -- | 0.481 | 20.7 | 71.43 | 1299 | -- | -- |
| 19.97 | 0.208 | 12.7 | 0.743 | 0.571 | 0.449 | -- | -0.0517 | 0.483 | 20.7 | 71.01 | 1299 | -- | -- |
| 19.97 | 0.208 | 12.7 | 0.734 | 0.57 | 0.446 | -- | -- | 0.48 | 20.7 | 71.15 | 1299 | -- | -- |
| 37.02 | 0.283 | 12.7 | 0.766 | -- | 0.445 | -- | -0.0413 | 0.488 | -- | 71.99 | 1419 | -- | -- |
| 27.19 | 0.244 | 12.7 | 0.645 | 0.558 | -- | 0.0466 | -- | 0.412 | 20.2 | -- | -- | -- | -- |
| 27.19 | 0.244 | 12.7 | 0.644 | 0.558 | -- | -- | -- | 0.412 | 20.2 | -- | -- | -- | -- |
| 36.97 | 0.283 | 12.7 | 0.728 | -- | 0.431 | -- | -- | 0.48 | -- | 71.78 | 1419 | -- | -- |
| 27.42 | 0.244 | 12.7 | -- | 0.636 | 0.634 | -- | -- | 0.477 | 20.6 | 65.93 | 29460 | -- | -- |
| 44.32 | 0.311 | 12.7 | 0.639 | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
| 38.11 | 0.289 | 12.7 | -- | 0.554 | -- | -- | -- | 0.34 | 20.3 | -- | -- | -- | -- |
| 42 | 0.302 | 12.7 | -- | -- | 0.793 | -- | -- | 0.362 | -- | 64.03 | 28831 | -- | -- |
| 55.09 | 0.346 | 12.7 | -- | -- | -- | -- | -- | 0.334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 2 | 19.95 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 3 | 19.96 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 6 | 19.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 20 | 20.07 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 21 | 20.09 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 34 | 20.14 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 37 | 20.15 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 81 | 20.26 | humidity | 70 | 1440 | > th | dose independent | sin | 20 | NA |
| 105 | 20.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 127 | 20.35 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 147 | 20.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 160 | 20.41 | humidity | 70 | 1440 | < th | dose independent | sin | 20 | NA |
| 188 | 20.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 196 | 20.46 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 197 | 20.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 268 | 20.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 318 | 20.51 | humidity | 60 | 1440 | > th | dose dependent | sin | 21 | NA |
| 387 | 20.58 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 416 | 20.61 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 460 | 20.64 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 471 | 20.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 869 | 20.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 950 | 20.84 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |