Os04g0680800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mlo-related protein family protein.
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Os04g0680800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mlo-related protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.05 | 0.566 | 8.89 | -0.0619 | 0.687 | 1.14 | -0.192 | -1.41 | 0.315 | 18.1 | 16.44 | 14 | -- | -- |
| 151.99 | 0.579 | 8.9 | -0.0773 | 0.784 | 0.764 | -1.48 | -- | 0.278 | 20.6 | 16.44 | 14 | -- | -- |
| 145.13 | 0.561 | 8.89 | -0.06 | 0.685 | 1.15 | -- | -1.42 | 0.316 | 18 | 16.21 | 13 | -- | -- |
| 156.34 | 0.582 | 8.89 | -0.0142 | 0.7 | 1.13 | -- | -- | 0.313 | 18.1 | 16.01 | 13 | -- | -- |
| 168.49 | 0.608 | 8.88 | -0.0808 | -- | 1.17 | -- | -1.47 | 0.266 | -- | 16.21 | 13 | -- | -- |
| 167.11 | 0.606 | 8.92 | -0.107 | 1.41 | -- | -1.5 | -- | 0.271 | 22 | -- | -- | -- | -- |
| 175.91 | 0.621 | 8.92 | -0.0483 | 1.42 | -- | -- | -- | 0.274 | 22 | -- | -- | -- | -- |
| 179.78 | 0.624 | 8.88 | -0.0464 | -- | 1.14 | -- | -- | 0.278 | -- | 13.8 | 9 | -- | -- |
| 156.33 | 0.582 | 8.89 | -- | 0.699 | 1.09 | -- | -- | 0.318 | 18.3 | 16.01 | 13 | -- | -- |
| 297.46 | 0.806 | 8.88 | -0.0309 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 175.97 | 0.621 | 8.92 | -- | 1.42 | -- | -- | -- | 0.28 | 22 | -- | -- | -- | -- |
| 178.84 | 0.623 | 8.88 | -- | -- | 1.15 | -- | -- | 0.279 | -- | 14.22 | 4 | -- | -- |
| 297.48 | 0.805 | 8.88 | -- | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 10 | 131.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 27 | 135.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 41 | 136.70 | radiation | 10.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 43 | 137.25 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 18 |
| 53 | 137.61 | radiation | 1.0 | 30 | < th | dose independent | rect. | 5 | 13 |
| 64 | 137.95 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 96 | 139.24 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 104 | 139.84 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 105 | 139.87 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 133 | 140.76 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 135 | 140.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 139 | 141.00 | radiation | 1.0 | 90 | < th | dose independent | sin | 2 | NA |
| 147 | 141.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 157 | 141.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 190 | 142.03 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 18 |
| 197 | 142.13 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 210 | 142.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 230 | 142.76 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 231 | 142.78 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 257 | 143.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 263 | 143.17 | humidity | 50.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 272 | 143.25 | humidity | 70.0 | 30 | > th | dose dependent | sin | 5 | NA |
| 277 | 143.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 284 | 143.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 308 | 143.57 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 16 |
| 332 | 143.74 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 347 | 143.88 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 353 | 143.90 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 16 |
| 371 | 144.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 20 | 16 |
| 399 | 144.23 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 401 | 144.26 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 402 | 144.26 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 412 | 144.31 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 6 |
| 438 | 144.46 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 470 | 144.59 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 498 | 144.73 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 504 | 144.77 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |
| 524 | 144.88 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 525 | 144.88 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 6 |
| 528 | 144.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 584 | 145.14 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 588 | 145.18 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 594 | 145.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 599 | 145.24 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 601 | 145.25 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 623 | 145.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 624 | 145.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 643 | 145.43 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 651 | 145.46 | radiation | 10.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 692 | 145.62 | humidity | 90.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 710 | 145.73 | radiation | 10.0 | 10 | > th | dose independent | sin | 3 | NA |
| 738 | 145.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 17 |
| 740 | 145.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 744 | 145.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 753 | 145.87 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 760 | 145.90 | humidity | 80.0 | 10 | < th | dose independent | sin | 4 | NA |
| 776 | 145.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 786 | 145.97 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 805 | 146.04 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 5 |
| 812 | 146.06 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 10 | 8 |
| 813 | 146.06 | temperature | 25.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 816 | 146.07 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 817 | 146.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 838 | 146.14 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 849 | 146.17 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 861 | 146.18 | humidity | 80.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 862 | 146.18 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 892 | 146.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 899 | 146.28 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 910 | 146.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 7 |
| 912 | 146.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 916 | 146.32 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 920 | 146.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 922 | 146.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 923 | 146.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 931 | 146.36 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 19 |
| 936 | 146.36 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 948 | 146.40 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 951 | 146.41 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 966 | 146.44 | humidity | 80.0 | 10 | > th | dose independent | sin | 3 | NA |