BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0680800 Os04g0680800|AK111773
(326 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26700.1 | chr1:9228300-9232237 FORWARD LENGTH=555 316 1e-86
AT5G53760.1 | chr5:21823055-21826289 FORWARD LENGTH=574 316 1e-86
AT1G11000.1 | chr1:3671935-3675909 REVERSE LENGTH=574 193 1e-49
AT4G02600.1 | chr4:1144141-1147156 FORWARD LENGTH=527 184 5e-47
AT2G44110.2 | chr2:18245489-18248316 REVERSE LENGTH=498 182 3e-46
AT4G24250.1 | chr4:12575008-12577517 REVERSE LENGTH=479 167 6e-42
AT2G17430.1 | chr2:7568018-7570758 FORWARD LENGTH=543 163 1e-40
AT3G45290.1 | chr3:16617586-16621352 FORWARD LENGTH=509 161 4e-40
AT1G61560.1 | chr1:22708875-22712032 REVERSE LENGTH=584 157 6e-39
AT2G33670.1 | chr2:14245138-14247879 FORWARD LENGTH=502 156 1e-38
AT1G42560.1 | chr1:15980209-15983328 REVERSE LENGTH=461 154 8e-38
AT1G11310.1 | chr1:3800899-3803870 REVERSE LENGTH=574 153 1e-37
AT2G39200.1 | chr2:16356255-16359797 REVERSE LENGTH=577 152 3e-37
AT2G17480.1 | chr2:7590559-7593768 REVERSE LENGTH=594 149 2e-36
AT5G65970.1 | chr5:26387509-26390407 REVERSE LENGTH=570 140 7e-34
>AT1G26700.1 | chr1:9228300-9232237 FORWARD LENGTH=555
Length = 554
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/251 (62%), Positives = 192/251 (76%), Gaps = 10/251 (3%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
+RSMEEEF+KIVGVSG LWGFVV FMLFNI GSNLYFW+AI+P+TLVLLVGAKLQ+VIAT
Sbjct: 273 IRSMEEEFQKIVGVSGPLWGFVVGFMLFNIKGSNLYFWLAIIPITLVLLVGAKLQHVIAT 332
Query: 61 LTAEGAKMNAY--GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
L E A + Y G +++PRD+LFWFKKPE LL LIHFI FQN+FELASFFWFWWQFGY+
Sbjct: 333 LALENASITEYASGIKLRPRDELFWFKKPELLLSLIHFIQFQNAFELASFFWFWWQFGYN 392
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGWXX 178
SCF++NHL+VY RLILGF+GQFLCSYSTLP+YALVTQMG+ YKAAL+P+R+RET++GW
Sbjct: 393 SCFLRNHLLVYLRLILGFSGQFLCSYSTLPLYALVTQMGTNYKAALLPQRVRETINGWGK 452
Query: 179 XXXXXXXXXXXXXXSTIRTETSTVCSLXXXXXXXEHGQFVETTPSRPYL--KIQLQPLRS 236
STIRTETST+ S+ + Q ++ + + P +++LQ +R
Sbjct: 453 ATRRKRRHGLYGDDSTIRTETSTIASVDEY-----NDQVLDVSETSPVQDNELELQLIRG 507
Query: 237 G-GGSARPGTP 246
G S+ TP
Sbjct: 508 ACGNSSSVETP 518
>AT5G53760.1 | chr5:21823055-21826289 FORWARD LENGTH=574
Length = 573
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/274 (59%), Positives = 195/274 (71%), Gaps = 17/274 (6%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
+RSMEEEF++IVGVSG LWGFVVAFMLFNI GSNLYFWIAI+PVTLVLLVGAKLQ+VIAT
Sbjct: 278 IRSMEEEFQRIVGVSGPLWGFVVAFMLFNIKGSNLYFWIAIIPVTLVLLVGAKLQHVIAT 337
Query: 61 LTAEGAKMNAY--GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
L E A + Y G +++PRD+LFWF KPE LL LIHFILFQNSFELASFFWFWWQFGY
Sbjct: 338 LALENAGLTEYPSGVKLRPRDELFWFNKPELLLSLIHFILFQNSFELASFFWFWWQFGYS 397
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGWXX 178
SCF+KNH +VY RL+LGFAGQFLCSYSTLP+YALVTQMG+ YKAALIP+RIRET+ GW
Sbjct: 398 SCFLKNHYLVYFRLLLGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIRGWGK 457
Query: 179 XXXXXXXXXXXXXXSTIRTETSTVCSLXXXXXXXEHGQFVETTPS----------RPYLK 228
ST+RTETST+ SL +H Q ++ T + + +
Sbjct: 458 ATRRKRRHGLYGDDSTVRTETSTIASL----EEYDH-QVLDVTETSFEQQRKQQEQGTTE 512
Query: 229 IQLQPLRSGGGSARPGTPCHPGVVGLPPLHSVST 262
++LQP++ T G L P S+S+
Sbjct: 513 LELQPIQPRNDCVPNDTSSRVGTPLLRPWLSISS 546
>AT1G11000.1 | chr1:3671935-3675909 REVERSE LENGTH=574
Length = 573
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
VR+ME+EF IVG+S LW + + + N++G N+YFWI+ +P LV+LVG KL++V++
Sbjct: 265 VRTMEDEFHGIVGISWPLWVYAIVCICINVHGLNMYFWISFVPAILVMLVGTKLEHVVSK 324
Query: 61 LTAEGAKMN---AYGPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGY 117
L E + + G ++KPRD LFWF KPE LL LI FI+FQN+FE+A+F WF W
Sbjct: 325 LALEVKEQQTGTSNGAQVKPRDGLFWFGKPEILLRLIQFIIFQNAFEMATFIWFLWGIKE 384
Query: 118 DSCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SCF+KNH+++ RLI G QF CSY T+P+ +VTQMGS++K A+I +R+++H W
Sbjct: 385 RSCFMKNHVMISSRLISGVLVQFWCSYGTVPLNVIVTQMGSRHKKAVIAESVRDSLHSW 443
>AT4G02600.1 | chr4:1144141-1147156 FORWARD LENGTH=527
Length = 526
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
+R++E++F+++VG+S LW FVV F+L N+NG + YFWIA +P L+L VG KL++VIA
Sbjct: 278 MRALEDDFKQVVGISWYLWIFVVIFLLLNVNGWHTYFWIAFIPFALLLAVGTKLEHVIAQ 337
Query: 61 LTAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGY 117
L E A+ + +KP D+ FWF KP+ +L+LIHFILFQN+FE+A FFW W +G+
Sbjct: 338 LAHEVAEKHVAIEGDLVVKPSDEHFWFSKPQIVLYLIHFILFQNAFEIAFFFWIWVTYGF 397
Query: 118 DSCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
DSC + + RL++G Q LCSYSTLP+YA+V+QMGS +K A+ ++ + GW
Sbjct: 398 DSCIMGQVRYIVPRLVIGVFIQVLCSYSTLPLYAIVSQMGSSFKKAIFEENVQVGLVGW 456
>AT2G44110.2 | chr2:18245489-18248316 REVERSE LENGTH=498
Length = 497
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
+R++ +F+K+VG+S LW FVV F+L NI ++YFW+A +P+ L+L VG KL+++I
Sbjct: 264 MRALNSDFKKVVGISWYLWVFVVLFLLLNIVAWHVYFWLAFIPLILLLAVGTKLEHIITD 323
Query: 61 LTAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGY 117
L E A+ + ++P DDLFWF+ P +L+LIHFILFQNSFE+A FF+ +QFG+
Sbjct: 324 LAHEVAEKHIAVEGDLVVRPSDDLFWFQSPRLVLFLIHFILFQNSFEIAYFFFILFQFGW 383
Query: 118 DSCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
DSC + + V RL++G Q LCSYSTLP+YALVTQMGS +K A+ + +E + GW
Sbjct: 384 DSCIMDHVKFVIPRLVIGVIIQLLCSYSTLPLYALVTQMGSSFKGAIFNEQTQEHLVGW 442
>AT4G24250.1 | chr4:12575008-12577517 REVERSE LENGTH=479
Length = 478
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
Query: 1 VRSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIAT 60
+R++E +F+K+V +S LW FVV F+L N+ G N YFW++ LP+ L+L+VGAKL+Y+I++
Sbjct: 267 LRTLEIDFKKVVSISWYLWLFVVVFLLLNVGGWNTYFWLSFLPLILLLMVGAKLEYIISS 326
Query: 61 LTAEGAKMNAYGPR--IKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
L + ++ + I P D+LFWF +P +L LIHFILFQNSFE+A FFW + +G
Sbjct: 327 LALDVSEKRSRAEEAVITPSDELFWFHRPGIVLQLIHFILFQNSFEIAFFFWILFTYGIH 386
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SC ++ + RL++G Q LCSYSTLP+YALVTQMGSK+K + ++ T+ GW
Sbjct: 387 SCIMEKLGYLIPRLVMGVLVQVLCSYSTLPLYALVTQMGSKFKKGIFDNVVQSTLEGW 444
>AT2G17430.1 | chr2:7568018-7570758 FORWARD LENGTH=543
Length = 542
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 113/178 (63%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +VG+S +LW V F+LFN+NG FW +I P+ ++L VG KLQ ++AT+
Sbjct: 281 RSLEDDFKLVVGISPVLWASFVIFLLFNVNGWRTLFWASIPPLLIILAVGTKLQAIMATM 340
Query: 62 TAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + +A P ++ D FWF P+ LL LIHF LFQN+F++ FFW W+ FG
Sbjct: 341 ALEIVETHAVVQGMPLVQGSDRYFWFDCPQLLLHLIHFALFQNAFQITHFFWIWYSFGLK 400
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SCF K+ +V +L L LCSY TLP+YALVTQMGS K A+ ++ + + W
Sbjct: 401 SCFHKDFNLVVSKLFLCLGALILCSYITLPLYALVTQMGSHMKKAVFDEQMAKALKKW 458
>AT3G45290.1 | chr3:16617586-16621352 FORWARD LENGTH=509
Length = 508
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+ E+F+ +VG+S L+W VV FML +++G +YF+++ +P+ +VL++G KL+ ++A +
Sbjct: 268 RSLHEDFKTVVGISPLMWLTVVIFMLLDVSGWRVYFYMSFVPLIIVLVIGTKLEMIVAKM 327
Query: 62 TAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
+ N+ P ++ D FWF P FLL ++H+ LF N+FE+A W WQFG +
Sbjct: 328 AVTIKENNSVIRGTPLVESNDTHFWFSNPRFLLSILHYTLFLNTFEMAFIVWITWQFGIN 387
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SC+ N I+ RL+L QFL SY TLP+YA+VTQMGS YK A++ ++ + W
Sbjct: 388 SCYHDNQGIIITRLVLAVTVQFLSSYITLPLYAIVTQMGSSYKRAILEEQLANVLRHW 445
>AT1G61560.1 | chr1:22708875-22712032 REVERSE LENGTH=584
Length = 583
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+EE+F+ IV ++ ++W V F+L N NG N Y W+ +P ++L+VG KLQ +I L
Sbjct: 279 RSLEEDFKTIVEINPVIWFIAVLFLLTNTNGLNSYLWLPFIPFIVILIVGTKLQVIITKL 338
Query: 62 ---TAEGAKMNAYGPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + P ++P D FWF +P F+L+LIH +LF N+F+LA F W ++FG
Sbjct: 339 GLRIQEKGDVVKGTPLVQPGDHFFWFGRPRFILFLIHLVLFTNAFQLAFFVWSTYEFGLK 398
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
+CF ++ + V R+ +G Q LCSY TLP+YALVTQMGSK K + R+ + W
Sbjct: 399 NCFHESRVDVIIRISIGLLVQILCSYVTLPLYALVTQMGSKMKPTVFNERVATALKSW 456
>AT2G33670.1 | chr2:14245138-14247879 FORWARD LENGTH=502
Length = 501
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +VG+S LW FV+ F+LF+++G + I ++P L L +G KLQ +I+ +
Sbjct: 266 RSLEDDFKVVVGISPELWAFVMLFLLFDVHGWYVTAVITMIPPLLTLAIGTKLQAIISDM 325
Query: 62 TAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + +A P + D FWF +P +L +IHFILFQN+FE+ FFW W++FG
Sbjct: 326 ALEIQERHAVIQGMPLVNVSDRHFWFSRPALVLHIIHFILFQNAFEITYFFWIWYEFGLR 385
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SCF + ++ R+ LG QFLCSY TLP+YALVTQMGS K ++ + + + W
Sbjct: 386 SCFHHHFALIIIRVALGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDDQTSKALKNW 443
>AT1G42560.1 | chr1:15980209-15983328 REVERSE LENGTH=461
Length = 460
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +VG+ LW FV+ F+LF+++G + I ++P L L +G KLQ +I+ +
Sbjct: 273 RSLEDDFKVVVGIRPELWAFVMLFLLFDVHGWYVTAVITMIPPLLTLAIGTKLQAIISYM 332
Query: 62 TAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + +A P + D FWF+KP+ +L +IHF+LFQN+FE+ FFW W++FG
Sbjct: 333 ALEIQERHAVIQGMPVVNVSDQHFWFEKPDLVLHMIHFVLFQNAFEITYFFWIWYEFGLR 392
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SCF + ++ R+ LG QFLCSY TLP+YALVTQMGS K ++ + + + W
Sbjct: 393 SCFHHHFGLIIIRVCLGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDEQTSKALEQW 450
>AT1G11310.1 | chr1:3800899-3803870 REVERSE LENGTH=574
Length = 573
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +V +S ++W V F+L N G Y W+ +P+ ++L+VG KL+ +I L
Sbjct: 282 RSLEKDFKTVVEISPVIWFVAVLFLLTNSYGLRSYLWLPFIPLVVILIVGTKLEVIITKL 341
Query: 62 ---TAEGAKMNAYGPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + P ++P DDLFWF KP F+L+LIH +LF N+F+LA F W ++F +
Sbjct: 342 GLRIQEKGDVVRGAPVVQPGDDLFWFGKPRFILFLIHLVLFTNAFQLAFFAWSTYEFNLN 401
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
+CF ++ V RL++G Q LCSY TLP+YALVTQMGSK K + R+ + W
Sbjct: 402 NCFHESTADVVIRLVVGAVVQILCSYVTLPLYALVTQMGSKMKPTVFNDRVATALKKW 459
>AT2G39200.1 | chr2:16356255-16359797 REVERSE LENGTH=577
Length = 576
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F +VG+S L+W V F+L N +G + Y W+ LP+ ++L+VGAKLQ +I+ L
Sbjct: 273 RSLEQDFTVVVGISPLIWCIAVLFILTNTHGWDSYLWLPFLPLIVILIVGAKLQMIISKL 332
Query: 62 ---TAEGAKMNAYGPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
E + P ++P DDLFWF +P F+L+LIH +LF N+F+LA F W ++F
Sbjct: 333 GLRIQEKGDVVKGAPVVEPGDDLFWFGRPRFILFLIHLVLFTNAFQLAFFVWSTYEFTLK 392
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
+CF + R+ +G Q LCSY TLP+YALVTQMG+ + + R+ + W
Sbjct: 393 NCFHHKTEDIAIRITMGVLIQVLCSYITLPLYALVTQMGTSMRPTIFNDRVANALKKW 450
>AT2G17480.1 | chr2:7590559-7593768 REVERSE LENGTH=594
Length = 593
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +VGVS +LWG V F+L NI+G + F +PV ++L VG KLQ ++ +
Sbjct: 297 RSLEDDFKVVVGVSPVLWGSFVLFLLLNIDGFKMMFIGTAIPVIIILAVGTKLQAIMTRM 356
Query: 62 TAEGAKMNAY---GPRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
+A P ++ D+ FWF +P +L L+HF LFQN+F++ FFW W+ FG D
Sbjct: 357 ALGITDRHAVVQGMPLVQGNDEYFWFGRPHLILHLMHFALFQNAFQITYFFWIWYSFGSD 416
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SC+ N I ++ + LCSY TLP+YALVTQMGS+ K ++ + + + W
Sbjct: 417 SCYHPNFKIALVKVAIALGVLCLCSYITLPLYALVTQMGSRMKKSVFDEQTSKALKKW 474
>AT5G65970.1 | chr5:26387509-26390407 REVERSE LENGTH=570
Length = 569
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 2 RSMEEEFEKIVGVSGLLWGFVVAFMLFNINGSNLYFWIAILPVTLVLLVGAKLQYVIATL 61
RS+E++F+ +VG+S LLW V F+L N+NG FW +ILPV ++L V KLQ ++ +
Sbjct: 279 RSLEDDFKVVVGISPLLWASFVIFLLLNVNGWEALFWASILPVLIILAVSTKLQAILTRM 338
Query: 62 TAEGAKMNAYG---PRIKPRDDLFWFKKPEFLLWLIHFILFQNSFELASFFWFWWQFGYD 118
+ +A P + D FWF +P+ LL L+HF LFQN+F+L FFW W+ FG
Sbjct: 339 ALGITERHAVVQGIPLVHGSDKYFWFNRPQLLLHLLHFALFQNAFQLTYFFWVWYSFGLK 398
Query: 119 SCFIKNHLIVYCRLILGFAGQFLCSYSTLPVYALVTQMGSKYKAALIPRRIRETMHGW 176
SCF + +V +L LG LCSY TLP+YALVTQMGS K A+ ++ + + W
Sbjct: 399 SCFHTDFKLVIVKLSLGVGALILCSYITLPLYALVTQMGSNMKKAVFDEQMAKALKKW 456
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.140 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,305,256
Number of extensions: 230170
Number of successful extensions: 644
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 627
Number of HSP's successfully gapped: 15
Length of query: 326
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,392,385
Effective search space: 1905071395
Effective search space used: 1905071395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)