Os04g0678800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : N-acetylglucosaminylphosphatidylinositol deacetylase family protein.
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Os04g0678800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : N-acetylglucosaminylphosphatidylinositol deacetylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.07 | 0.301 | 9.06 | 0.906 | 1.42 | 0.433 | 0.995 | -1.14 | 0.618 | 19.2 | 8.087 | 1450 | -- | -- |
| 43.55 | 0.307 | 9.06 | 0.826 | 1.41 | 0.386 | 0.997 | -- | 0.617 | 19.1 | 13.05 | 1477 | -- | -- |
| 43.09 | 0.306 | 9.06 | 0.943 | 1.51 | 0.37 | -- | -1.59 | 0.611 | 19.5 | 15.14 | 1242 | -- | -- |
| 45.83 | 0.315 | 9.06 | 0.768 | 1.43 | 0.38 | -- | -- | 0.589 | 19.1 | 13.02 | 1494 | -- | -- |
| 138.4 | 0.551 | 9.05 | 0.685 | -- | 0.457 | -- | 0.0704 | 0.485 | -- | 8.608 | 1495 | -- | -- |
| 47.41 | 0.323 | 9.08 | 0.748 | 1.43 | -- | 0.932 | -- | 0.502 | 19.3 | -- | -- | -- | -- |
| 49.74 | 0.33 | 9.08 | 0.728 | 1.44 | -- | -- | -- | 0.504 | 19.3 | -- | -- | -- | -- |
| 137.24 | 0.548 | 9.05 | 0.695 | -- | 0.459 | -- | -- | 0.497 | -- | 5.388 | 1505 | -- | -- |
| 60.34 | 0.362 | 9.07 | -- | 1.48 | 0.425 | -- | -- | 0.562 | 19.1 | 9.998 | 1482 | -- | -- |
| 158.97 | 0.589 | 9.05 | 0.703 | -- | -- | -- | -- | 0.479 | -- | -- | -- | -- | -- |
| 63.72 | 0.373 | 9.1 | -- | 1.43 | -- | -- | -- | 0.423 | 19.3 | -- | -- | -- | -- |
| 149.97 | 0.572 | 9.06 | -- | -- | 0.462 | -- | -- | 0.42 | -- | 5.388 | 1505 | -- | -- |
| 172 | 0.612 | 9.07 | -- | -- | -- | -- | -- | 0.401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.47 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 37.47 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 3 | 37.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 37.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 37.77 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 14 | 38.51 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 16 | 38.64 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 18 | 38.66 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 25 | 38.84 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 37 | 38.93 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 50 | 38.97 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 64 | 39.05 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 108 | 39.26 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 147 | 39.47 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 153 | 39.56 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 154 | 39.59 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 176 | 39.71 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 211 | 39.95 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 233 | 40.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 246 | 40.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 261 | 40.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 303 | 40.26 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 321 | 40.29 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 9 |
| 334 | 40.31 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 336 | 40.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 339 | 40.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 341 | 40.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 343 | 40.33 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 396 | 40.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 398 | 40.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 400 | 40.33 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 458 | 40.37 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 461 | 40.39 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 469 | 40.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 478 | 40.42 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 512 | 40.47 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 516 | 40.48 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 544 | 40.53 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 567 | 40.55 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 568 | 40.55 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 617 | 40.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 619 | 40.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 647 | 40.63 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 656 | 40.64 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 684 | 40.67 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 694 | 40.68 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 722 | 40.70 | radiation | 10.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 902 | 40.86 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 19 |
| 913 | 40.88 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 929 | 40.90 | radiation | 10.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 930 | 40.90 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 977 | 40.94 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 987 | 40.95 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 19 |