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Os04g0670800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UAS domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0151) R2 : 0.0979
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.224 (0.0318) R2dN8 : 0.126 R2N8 : 0.0979
σ : 0.284
deviance : 37.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.56 0.167 11.6 0.523 0.545 0.255 -0.176 -0.0511 0.335 18.6 22.16 33694 -- --
12.54 0.165 11.6 0.532 0.547 0.251 -0.165 -- 0.337 18.6 21.1 33680 -- --
12.63 0.166 11.6 0.524 0.545 0.256 -- -0.0571 0.334 18.7 22 33704 -- --
12.61 0.165 11.6 0.543 0.54 0.246 -- -- 0.338 18.6 21.02 33679 -- --
27.65 0.245 11.6 0.547 -- 0.258 -- -0.117 0.339 -- 20.63 33150 -- --
14.25 0.177 11.6 0.553 0.537 -- -0.171 -- 0.295 18.6 -- -- -- --
14.32 0.177 11.6 0.555 0.536 -- -- -- 0.294 18.6 -- -- -- --
27.65 0.245 11.6 0.548 -- 0.257 -- -- 0.339 -- 20.33 33158 -- --
16.44 0.189 11.6 -- 0.553 0.521 -- -- 0.16 18.5 50 47520 -- --
29.32 0.253 11.6 0.542 -- -- -- -- 0.284 -- -- -- -- --
22.44 0.222 11.6 -- 0.529 -- -- -- 0.233 18.7 -- -- -- --
30.36 0.257 11.6 -- -- 0.458 -- -- 0.137 -- 57.15 34546 -- --
37.08 0.284 11.6 -- -- -- -- -- 0.224 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.79 wind 1 14400 < th dose independent rect. 22 4
2 11.84 wind 1 14400 > th dose independent rect. 23 3
8 12.09 wind 1 14400 < th dose dependent rect. 22 4
28 12.27 wind 1 14400 < th dose dependent rect. 16 10
48 12.37 wind 1 14400 < th dose dependent rect. 6 20
50 12.38 wind 1 14400 < th dose dependent sin 14 NA
59 12.42 wind 1 14400 < th dose dependent rect. 11 16
60 12.43 wind 1 43200 > th dose independent rect. 16 10
62 12.43 wind 1 14400 < th dose dependent rect. 11 1
72 12.46 radiation 10 43200 > th dose independent rect. 12 2
100 12.51 wind 1 14400 > th dose independent rect. 8 1
103 12.51 radiation 10 43200 < th dose dependent rect. 13 1
104 12.51 radiation 10 43200 < th dose dependent rect. 11 3
107 12.52 atmosphere 1005 720 > th dose independent rect. 20 2
114 12.52 wind 1 14400 > th dose independent rect. 5 21
121 12.53 radiation 10 43200 < th dose dependent rect. 11 1
135 12.55 humidity 70 43200 > th dose independent rect. 1 18
140 12.55 wind 1 14400 < th dose dependent rect. 19 18
143 12.55 wind 1 14400 < th dose dependent rect. 17 19
145 12.56 humidity 70 43200 > th dose independent rect. 11 1
150 12.56 humidity 70 43200 > th dose independent rect. 2 14
183 12.57 humidity 70 43200 < th dose independent rect. 11 20
187 12.57 humidity 70 43200 > th dose independent rect. 10 22
198 12.58 humidity 90 43200 < th dose independent rect. 4 1
200 12.58 wind 1 14400 > th dose independent rect. 7 6
214 12.58 humidity 70 43200 < th dose independent rect. 11 18
215 12.58 humidity 70 43200 < th dose independent rect. 24 18
218 12.58 wind 1 14400 < th dose independent rect. 6 20
231 12.58 humidity 70 43200 > th dose independent rect. 14 22
232 12.58 humidity 70 43200 > th dose independent rect. 17 22
248 12.58 humidity 60 43200 > th dose dependent rect. 2 11
250 12.58 wind 1 14400 < th dose dependent rect. 21 16
253 12.59 humidity 70 43200 > th dose independent sin 1 NA
256 12.59 humidity 70 43200 > th dose independent no NA NA
257 12.59 humidity 70 43200 < th dose independent rect. 11 1
272 12.59 humidity 70 43200 < th dose independent rect. 11 16
282 12.59 humidity 70 43200 > th dose independent rect. 10 19
350 12.60 humidity 70 43200 < th dose independent rect. 2 14
358 12.60 humidity 70 43200 > th dose independent rect. 10 17
369 12.60 humidity 70 43200 < th dose independent rect. 14 18
378 12.60 humidity 70 43200 > th dose independent rect. 14 20
407 12.60 humidity 90 720 < th dose dependent rect. 19 3
408 12.60 humidity 60 43200 > th dose dependent rect. 3 8
419 12.61 humidity 70 43200 < th dose independent no NA NA
420 12.61 radiation 10 43200 > th dose independent sin 22 NA
433 12.61 humidity 70 43200 < th dose independent rect. 11 13
434 12.61 humidity 70 43200 > th dose independent rect. 10 14
454 12.61 humidity 70 43200 > th dose independent rect. 14 18
491 12.61 humidity 70 43200 < th dose independent rect. 4 23
494 12.61 humidity 70 43200 < th dose independent rect. 13 23
495 12.61 humidity 70 43200 < th dose independent rect. 17 23
501 12.61 humidity 50 43200 > th dose dependent sin 4 NA
517 12.62 wind 1 43200 > th dose independent sin 16 NA
518 12.62 humidity 70 43200 > th dose independent sin 16 NA
525 12.62 humidity 70 43200 < th dose independent sin 14 NA
531 12.62 humidity 80 43200 < th dose independent rect. 8 1
544 12.62 humidity 70 43200 > th dose independent rect. 10 12
569 12.62 humidity 70 43200 < th dose independent rect. 14 15
651 12.63 humidity 70 43200 > th dose independent sin 12 NA
659 12.63 wind 1 43200 > th dose independent rect. 10 3
660 12.63 humidity 70 43200 < th dose independent rect. 10 5
662 12.63 humidity 70 43200 > th dose independent rect. 9 6
683 12.63 humidity 70 43200 < th dose independent rect. 14 13
692 12.63 humidity 70 43200 > th dose independent rect. 14 15
693 12.63 humidity 70 43200 > th dose independent rect. 16 15
746 12.63 wind 1 14400 < th dose dependent rect. 10 23
749 12.63 wind 1 14400 < th dose dependent rect. 19 23
750 12.63 wind 1 14400 < th dose dependent rect. 21 23
760 12.64 radiation 10 43200 > th dose independent no NA NA
779 12.64 humidity 80 43200 < th dose independent rect. 2 11
794 12.64 humidity 70 43200 > th dose independent rect. 14 13
795 12.64 humidity 70 43200 > th dose independent rect. 16 13
952 12.64 wind 1 14400 < th dose dependent rect. 10 21
967 12.65 humidity 80 43200 > th dose independent rect. 4 7
971 12.65 humidity 80 43200 < th dose independent rect. 4 8
973 12.65 humidity 70 43200 > th dose independent rect. 14 9
981 12.65 humidity 70 43200 < th dose independent rect. 13 10