Os04g0661600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Molybdopterin biosynthesis CNX1 protein (Molybdenum cofactor biosynthesis enzyme CNX1).
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Os04g0661600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Molybdopterin biosynthesis CNX1 protein (Molybdenum cofactor biosynthesis enzyme CNX1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.87 | 0.37 | 10.3 | -0.79 | 1.21 | -1.67 | 0.0567 | 3.6 | -0.104 | 22.9 | 25.58 | 1524 | -- | -- |
| 59.52 | 0.359 | 10.4 | -1.53 | 1.24 | -1.41 | 0.225 | -- | -0.127 | 22.8 | 23.11 | 6165 | -- | -- |
| 61.88 | 0.366 | 10.3 | -0.787 | 1.21 | -1.67 | -- | 3.66 | -0.111 | 22.9 | 25.66 | 1527 | -- | -- |
| 59.03 | 0.358 | 10.4 | -1.64 | 1.2 | -1.36 | -- | -- | -0.243 | 22.8 | 25.1 | 6113 | -- | -- |
| 152.01 | 0.574 | 10.3 | -0.799 | -- | -1.64 | -- | 3.75 | -0.116 | -- | 25.73 | 1563 | -- | -- |
| 134.75 | 0.544 | 10.5 | -2.19 | 1.15 | -- | -0.00975 | -- | -0.455 | 22.9 | -- | -- | -- | -- |
| 134.75 | 0.544 | 10.5 | -2.19 | 1.15 | -- | -- | -- | -0.455 | 22.9 | -- | -- | -- | -- |
| 144.91 | 0.561 | 10.4 | -1.67 | -- | -1.35 | -- | -- | -0.284 | -- | 25.8 | 5942 | -- | -- |
| 70.02 | 0.39 | 10.3 | -- | 1.22 | -2.05 | -- | -- | 0.425 | 23.1 | 17.24 | 28912 | -- | -- |
| 217.22 | 0.689 | 10.4 | -2.17 | -- | -- | -- | -- | -0.447 | -- | -- | -- | -- | -- |
| 261.56 | 0.757 | 10.4 | -- | 1.13 | -- | -- | -- | -0.211 | 22.8 | -- | -- | -- | -- |
| 157.71 | 0.585 | 10.2 | -- | -- | -2.13 | -- | -- | 0.477 | -- | 15.21 | 28994 | -- | -- |
| 341.25 | 0.862 | 10.4 | -- | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.60 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 58.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 3 | 58.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 14 | 58.69 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 15 | 58.77 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 20 | 58.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 33 | 59.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 35 | 59.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 65 | 59.39 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 98 | 59.53 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 17 |
| 109 | 59.60 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 15 |
| 119 | 59.63 | temperature | 25 | 14400 | > th | dose dependent | sin | 17 | NA |
| 178 | 60.01 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 197 | 60.06 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 270 | 60.42 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 277 | 60.45 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 287 | 60.50 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 293 | 60.53 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 302 | 60.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 317 | 60.58 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 364 | 60.65 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 380 | 60.69 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 391 | 60.72 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 407 | 60.75 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 427 | 60.81 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 428 | 60.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 430 | 60.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 465 | 60.95 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 466 | 60.96 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 474 | 61.00 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 485 | 61.07 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 489 | 61.11 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 500 | 61.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 518 | 61.27 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 575 | 61.51 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 582 | 61.56 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 602 | 61.67 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 605 | 61.68 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 608 | 61.69 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 642 | 61.80 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 650 | 61.85 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 665 | 61.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 671 | 61.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 680 | 61.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 700 | 62.01 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 724 | 62.06 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 736 | 62.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 738 | 62.08 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 762 | 62.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 771 | 62.20 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 792 | 62.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 803 | 62.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 20 |
| 846 | 62.38 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 862 | 62.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 889 | 62.46 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 935 | 62.54 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 944 | 62.55 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 945 | 62.55 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 991 | 62.64 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 15 |