Os04g0660600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, V0 complex, subunit H family protein.
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Os04g0660600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, V0 complex, subunit H family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.2 | 0.258 | 12.2 | -0.343 | 0.125 | -0.516 | -0.183 | -0.188 | -0.0578 | 13.5 | 75 | 2584 | -- | -- |
| 30.15 | 0.256 | 12.2 | -0.358 | 0.13 | -0.558 | -0.218 | -- | -0.0631 | 13.3 | 75 | 2571 | -- | -- |
| 30.22 | 0.256 | 12.2 | -0.343 | 0.124 | -0.539 | -- | -0.214 | -0.0575 | 14.2 | 76 | 2630 | -- | -- |
| 30.27 | 0.256 | 12.2 | -0.37 | 0.126 | -0.567 | -- | -- | -0.065 | 14.3 | 75.07 | 2635 | -- | -- |
| 31.01 | 0.259 | 12.2 | -0.349 | -- | -0.503 | -- | -0.147 | -0.0618 | -- | 75.66 | 2748 | -- | -- |
| 36.71 | 0.284 | 12.2 | -0.322 | 0.015 | -- | -0.276 | -- | -0.0025 | 12.2 | -- | -- | -- | -- |
| 36.92 | 0.285 | 12.2 | -0.332 | 0.0503 | -- | -- | -- | -0.00274 | 16.9 | -- | -- | -- | -- |
| 31.03 | 0.259 | 12.2 | -0.368 | -- | -0.52 | -- | -- | -0.068 | -- | 75.13 | 2753 | -- | -- |
| 33.86 | 0.271 | 12.2 | -- | 0.128 | -0.535 | -- | -- | -0.0206 | 14.4 | 75.77 | 2638 | -- | -- |
| 37.06 | 0.284 | 12.2 | -0.334 | -- | -- | -- | -- | -0.00403 | -- | -- | -- | -- | -- |
| 39.82 | 0.295 | 12.2 | -- | 0.0564 | -- | -- | -- | 0.0342 | 16.7 | -- | -- | -- | -- |
| 34.36 | 0.273 | 12.2 | -- | -- | -0.543 | -- | -- | -0.0547 | -- | 75.47 | 3206 | -- | -- |
| 39.99 | 0.295 | 12.2 | -- | -- | -- | -- | -- | 0.033 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.09 | radiation | 1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 2 | 30.09 | radiation | 40 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 6 | 30.26 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 7 | 30.27 | radiation | 20 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 23 | 30.30 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 19 |
| 24 | 30.30 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 81 | 30.45 | radiation | 40 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 84 | 30.46 | radiation | 40 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 112 | 30.48 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 174 | 30.60 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 177 | 30.61 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 264 | 30.71 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 265 | 30.72 | radiation | 20 | 4320 | < th | dose independent | sin | 10 | NA |
| 266 | 30.72 | radiation | 40 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 290 | 30.74 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 291 | 30.74 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 380 | 30.81 | radiation | 40 | 4320 | < th | dose independent | sin | 11 | NA |
| 393 | 30.82 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 549 | 30.95 | radiation | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 555 | 30.96 | radiation | 1 | 4320 | > th | dose dependent | sin | 11 | NA |
| 565 | 30.98 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 808 | 31.16 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 857 | 31.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 859 | 31.18 | radiation | 30 | 4320 | > th | dose dependent | sin | 12 | NA |
| 860 | 31.18 | humidity | 70 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 866 | 31.19 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 906 | 31.20 | radiation | 40 | 4320 | > th | dose independent | sin | 11 | NA |
| 918 | 31.21 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 923 | 31.21 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 930 | 31.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 937 | 31.23 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 940 | 31.23 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 961 | 31.26 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 963 | 31.26 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 966 | 31.26 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |