Os04g0653300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aux/IAA_ARF_dimerisation domain containing protein.
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Os04g0653300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aux/IAA_ARF_dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.35 | 0.591 | 6.95 | 0.776 | 0.813 | -2.77 | -0.159 | 1.19 | -0.223 | 10.4 | 15.19 | 112 | -- | -- |
| 159.57 | 0.588 | 6.96 | 0.649 | 0.833 | -2.83 | -0.0687 | -- | -0.236 | 10.6 | 15.03 | 113 | -- | -- |
| 158.43 | 0.586 | 6.95 | 0.754 | 0.813 | -2.75 | -- | 1.09 | -0.228 | 10.4 | 15.3 | 113 | -- | -- |
| 159.36 | 0.588 | 6.97 | 0.601 | 0.813 | -2.8 | -- | -- | -0.27 | 10.4 | 14.8 | 113 | -- | -- |
| 165.13 | 0.599 | 6.95 | 0.924 | -- | -2.87 | -- | 1.63 | -0.173 | -- | 11.19 | 478 | -- | -- |
| 238.44 | 0.724 | 7.05 | 0.00157 | 0.97 | -- | 0.51 | -- | -0.667 | 6.85 | -- | -- | -- | -- |
| 239.1 | 0.724 | 7.06 | 0.0109 | 0.972 | -- | -- | -- | -0.669 | 6.89 | -- | -- | -- | -- |
| 166.94 | 0.602 | 6.98 | 0.642 | -- | -2.77 | -- | -- | -0.234 | -- | 15 | 482 | -- | -- |
| 167.77 | 0.603 | 6.99 | -- | 0.773 | -2.5 | -- | -- | -0.374 | 10 | 14.99 | 113 | -- | -- |
| 288.6 | 0.794 | 7.08 | 0.0315 | -- | -- | -- | -- | -0.65 | -- | -- | -- | -- | -- |
| 239.11 | 0.723 | 7.06 | -- | 0.972 | -- | -- | -- | -0.67 | 6.89 | -- | -- | -- | -- |
| 177.05 | 0.62 | 7.01 | -- | -- | -2.49 | -- | -- | -0.344 | -- | 15.47 | 464 | -- | -- |
| 288.63 | 0.793 | 7.08 | -- | -- | -- | -- | -- | -0.654 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 2 | 153.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 7 | 155.98 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 12 | 156.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 13 | 156.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 29 | 157.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 35 | 157.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 42 | 157.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 46 | 157.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 53 | 158.06 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 58 | 158.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 60 | 158.14 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 69 | 158.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 70 | 158.30 | temperature | 25 | 4320 | < th | dose dependent | rect. | 19 | 7 |
| 81 | 158.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 137 | 158.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 140 | 158.85 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 147 | 158.91 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 165 | 159.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 177 | 159.07 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 191 | 159.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 208 | 159.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 240 | 159.29 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 265 | 159.40 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 286 | 159.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 291 | 159.47 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 336 | 159.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 382 | 159.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 394 | 159.81 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 417 | 159.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 479 | 160.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 563 | 160.25 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 591 | 160.36 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 881 | 161.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 919 | 161.14 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |