Os04g0653000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os04g0653000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.99 | 0.266 | 13.3 | -0.226 | 0.882 | -1.54 | 0.404 | -2.16 | 0.265 | 7 | 9 | 593 | -- | -- |
| 32.08 | 0.264 | 13.3 | -0.248 | 0.883 | -1.07 | 0.393 | -- | 0.267 | 6.99 | 8.932 | 583 | -- | -- |
| 32.25 | 0.264 | 13.3 | -0.214 | 0.89 | -1.56 | -- | -1.83 | 0.268 | 6.95 | 8.8 | 534 | -- | -- |
| 32.34 | 0.265 | 13.3 | -0.24 | 0.892 | -1.13 | -- | -- | 0.268 | 6.96 | 8.794 | 570 | -- | -- |
| 72.76 | 0.397 | 13.3 | -0.234 | -- | -1.11 | -- | -1.97 | 0.269 | -- | 8.715 | 570 | -- | -- |
| 36.5 | 0.283 | 13.3 | -0.335 | 0.842 | -- | 0.565 | -- | 0.233 | 6.97 | -- | -- | -- | -- |
| 37.32 | 0.286 | 13.3 | -0.325 | 0.844 | -- | -- | -- | 0.232 | 6.92 | -- | -- | -- | -- |
| 72.88 | 0.398 | 13.3 | -0.253 | -- | -0.675 | -- | -- | 0.27 | -- | 8.964 | 603 | -- | -- |
| 33.71 | 0.27 | 13.3 | -- | 0.889 | -1.25 | -- | -- | 0.297 | 6.98 | 8.79 | 570 | -- | -- |
| 74.74 | 0.404 | 13.3 | -0.307 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 40.11 | 0.296 | 13.3 | -- | 0.841 | -- | -- | -- | 0.268 | 6.94 | -- | -- | -- | -- |
| 74.08 | 0.401 | 13.3 | -- | -- | -0.661 | -- | -- | 0.306 | -- | 8.808 | 1039 | -- | -- |
| 77.23 | 0.41 | 13.3 | -- | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 30.70 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 9 | 30.88 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 13 | 30.90 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 14 | 30.90 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 26 | 31.08 | wind | 7 | 270 | < th | dose independent | rect. | 7 | 21 |
| 28 | 31.13 | radiation | 10 | 270 | < th | dose independent | rect. | 4 | 17 |
| 29 | 31.13 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 19 |
| 33 | 31.16 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 17 |
| 48 | 31.37 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 54 | 31.42 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 11 |
| 69 | 31.48 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 3 |
| 85 | 31.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 88 | 31.62 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 92 | 31.64 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 101 | 31.66 | radiation | 20 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 106 | 31.68 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 107 | 31.69 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 108 | 31.69 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 111 | 31.70 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 1 |
| 115 | 31.71 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 16 |
| 116 | 31.71 | radiation | 20 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 125 | 31.76 | wind | 7 | 270 | < th | dose independent | rect. | 7 | 10 |
| 131 | 31.77 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 147 | 31.78 | radiation | 10 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 157 | 31.80 | radiation | 1 | 4320 | < th | dose dependent | sin | 11 | NA |
| 161 | 31.80 | radiation | 40 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 164 | 31.81 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 22 |
| 166 | 31.82 | wind | 9 | 270 | > th | dose dependent | sin | 11 | NA |
| 173 | 31.83 | radiation | 1 | 4320 | > th | dose independent | sin | 11 | NA |
| 175 | 31.83 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 183 | 31.84 | radiation | 40 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 204 | 31.88 | wind | 7 | 270 | > th | dose dependent | sin | 16 | NA |
| 212 | 31.88 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 213 | 31.89 | radiation | 10 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 214 | 31.89 | radiation | 10 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 216 | 31.89 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 12 |
| 217 | 31.89 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 218 | 31.90 | wind | 9 | 270 | > th | dose independent | sin | 14 | NA |
| 228 | 31.91 | wind | 9 | 270 | > th | dose independent | sin | 12 | NA |
| 239 | 31.92 | radiation | 1 | 4320 | < th | dose independent | sin | 11 | NA |
| 243 | 31.92 | temperature | 20 | 10 | > th | dose dependent | sin | 10 | NA |
| 296 | 31.97 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 307 | 31.98 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 308 | 31.98 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 328 | 31.98 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 338 | 31.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 353 | 32.00 | wind | 9 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 357 | 32.01 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 358 | 32.01 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 371 | 32.01 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 372 | 32.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 374 | 32.02 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 380 | 32.02 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 394 | 32.03 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 12 |
| 396 | 32.03 | radiation | 10 | 270 | < th | dose independent | rect. | 13 | 19 |
| 398 | 32.03 | wind | 9 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 404 | 32.04 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 411 | 32.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 416 | 32.05 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 417 | 32.05 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 423 | 32.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 441 | 32.06 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 442 | 32.06 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 443 | 32.06 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 444 | 32.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 445 | 32.06 | radiation | 30 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 449 | 32.06 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 22 |
| 452 | 32.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 459 | 32.07 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 473 | 32.08 | radiation | 10 | 270 | < th | dose independent | sin | 23 | NA |
| 486 | 32.09 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 506 | 32.10 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 533 | 32.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 539 | 32.12 | wind | 9 | 270 | < th | dose independent | sin | 13 | NA |
| 543 | 32.12 | radiation | 30 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 548 | 32.12 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 14 |
| 553 | 32.12 | radiation | 40 | 270 | < th | dose independent | rect. | 3 | 18 |
| 576 | 32.13 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 577 | 32.13 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 11 |
| 582 | 32.13 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 599 | 32.14 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 608 | 32.14 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 614 | 32.15 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 622 | 32.15 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 627 | 32.15 | humidity | 90 | 30 | < th | dose independent | rect. | 17 | 16 |
| 653 | 32.16 | temperature | 15 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 658 | 32.16 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 672 | 32.16 | temperature | 15 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 674 | 32.16 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 683 | 32.16 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 697 | 32.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 698 | 32.17 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 714 | 32.17 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 717 | 32.17 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 743 | 32.18 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 10 | NA |
| 745 | 32.18 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 9 | NA |
| 764 | 32.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 766 | 32.18 | temperature | 15 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 799 | 32.18 | wind | 9 | 720 | > th | dose independent | rect. | 21 | 19 |
| 822 | 32.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 827 | 32.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 831 | 32.19 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 896 | 32.20 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 7 | NA |
| 953 | 32.20 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 19 |
| 966 | 32.20 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 974 | 32.21 | temperature | 15 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 976 | 32.21 | temperature | 15 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 979 | 32.21 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 981 | 32.21 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 23 | 3 |