Os04g0652600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0652600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.81 | 0.579 | 5.05 | -5.03 | 0.583 | -1.86 | -1.66 | -0.889 | -0.615 | 4.25 | 25.7 | 2520 | -- | -- |
| 152 | 0.574 | 5.03 | -4.82 | 0.593 | -1.92 | -1.66 | -- | -0.605 | 4.28 | 25.96 | 2551 | -- | -- |
| 159.02 | 0.587 | 5.04 | -4.95 | 0.605 | -1.85 | -- | -0.686 | -0.61 | 4.55 | 25.85 | 2600 | -- | -- |
| 159.28 | 0.588 | 5.02 | -4.79 | 0.597 | -1.91 | -- | -- | -0.593 | 4.62 | 26 | 2609 | -- | -- |
| 171.73 | 0.61 | 5.03 | -4.88 | -- | -2.1 | -- | -0.412 | -0.535 | -- | 25.63 | 2039 | -- | -- |
| 293.05 | 0.803 | 5.05 | -5.42 | 0.466 | -- | -1.96 | -- | -0.698 | 4.95 | -- | -- | -- | -- |
| 300.2 | 0.811 | 5.04 | -5.41 | 0.51 | -- | -- | -- | -0.687 | 6.57 | -- | -- | -- | -- |
| 171.69 | 0.61 | 5.02 | -4.78 | -- | -2.14 | -- | -- | -0.521 | -- | 25.7 | 2045 | -- | -- |
| 265.12 | 0.758 | 4.59 | -- | 0.452 | -4.79 | -- | -- | 1.36 | 5.6 | 12.38 | 33321 | -- | -- |
| 313.74 | 0.828 | 5.05 | -5.4 | -- | -- | -- | -- | -0.676 | -- | -- | -- | -- | -- |
| 1071.09 | 1.53 | 4.91 | -- | 0.448 | -- | -- | -- | -0.0844 | 7.26 | -- | -- | -- | -- |
| 232.83 | 0.711 | 4.58 | -- | -- | -4.43 | -- | -- | 1.41 | -- | 17.3 | 47520 | -- | -- |
| 1081.74 | 1.54 | 4.92 | -- | -- | -- | -- | -- | -0.0776 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.68 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 2 | 145.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 145.61 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 5 | 145.75 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 10 | 146.03 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 15 | 146.96 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 30 | 147.74 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 15 |
| 31 | 147.96 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 34 | 148.20 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 37 | 148.32 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 38 | 148.40 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 16 |
| 51 | 148.83 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 55 | 148.89 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 92 | 149.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 98 | 149.51 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 110 | 149.65 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 119 | 149.73 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 127 | 149.84 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 130 | 149.86 | temperature | 20.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 155 | 150.14 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 162 | 150.22 | temperature | 20.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 180 | 150.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 206 | 150.77 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 275 | 151.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 277 | 151.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 312 | 151.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 321 | 151.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 412 | 152.70 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 450 | 153.14 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 459 | 153.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 478 | 153.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 482 | 153.42 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 492 | 153.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 511 | 153.55 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 515 | 153.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 524 | 153.57 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 655 | 153.88 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 657 | 153.89 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 664 | 153.92 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 703 | 154.05 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 734 | 154.14 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 830 | 154.51 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 834 | 154.52 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 917 | 155.07 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 10 |
| 940 | 155.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 953 | 155.33 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 954 | 155.33 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 977 | 155.45 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 14 |