Os04g0645500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0645500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.02 | 0.661 | 6.02 | -0.17 | 1.9 | -1.98 | -0.914 | 0.128 | -0.47 | 3.34 | 80.53 | 864 | -- | -- |
| 197.36 | 0.654 | 6.01 | -0.11 | 2.01 | -2.04 | -0.743 | -- | -0.432 | 3.47 | 81.06 | 929 | -- | -- |
| 198.6 | 0.656 | 6 | -0.188 | 2.11 | -2.07 | -- | -0.0451 | -0.433 | 3.61 | 80.71 | 1001 | -- | -- |
| 198.36 | 0.656 | 6.01 | -0.128 | 2.13 | -2.05 | -- | -- | -0.454 | 3.7 | 80 | 1005 | -- | -- |
| 243.38 | 0.727 | 6 | -0.243 | -- | -3 | -- | 0.677 | -0.347 | -- | 86.9 | 359 | -- | -- |
| 270.34 | 0.771 | 5.98 | -0.437 | 2.05 | -- | -0.608 | -- | -0.376 | 4.73 | -- | -- | -- | -- |
| 271.3 | 0.771 | 5.98 | -0.434 | 2.05 | -- | -- | -- | -0.373 | 4.75 | -- | -- | -- | -- |
| 244.89 | 0.729 | 6.01 | -0.246 | -- | -2.91 | -- | -- | -0.361 | -- | 87.41 | 359 | -- | -- |
| 198.81 | 0.657 | 6.01 | -- | 2.13 | -2.06 | -- | -- | -0.442 | 3.69 | 80 | 1005 | -- | -- |
| 494.16 | 1.04 | 6 | -0.357 | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
| 276.26 | 0.778 | 5.97 | -- | 2.04 | -- | -- | -- | -0.325 | 4.75 | -- | -- | -- | -- |
| 246.41 | 0.731 | 6 | -- | -- | -2.93 | -- | -- | -0.341 | -- | 86.86 | 359 | -- | -- |
| 497.51 | 1.04 | 5.99 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.39 | humidity | 80 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 6 | 193.99 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 14 | 195.95 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 20 |
| 15 | 196.14 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 21 |
| 17 | 196.50 | humidity | 80 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 22 | 196.78 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 15 |
| 27 | 196.97 | humidity | 80 | 720 | < th | dose dependent | sin | 13 | NA |
| 29 | 197.13 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 18 |
| 38 | 197.51 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 53 | 198.23 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 12 |
| 58 | 198.41 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 6 |
| 60 | 198.46 | radiation | 10 | 720 | > th | dose independent | sin | 13 | NA |
| 67 | 198.69 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 3 |
| 74 | 198.92 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 11 |
| 78 | 199.11 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 6 |
| 100 | 199.63 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 103 | 199.71 | humidity | 70 | 720 | < th | dose independent | sin | 16 | NA |
| 104 | 199.73 | humidity | 70 | 720 | > th | dose independent | rect. | 2 | 18 |
| 115 | 199.89 | humidity | 70 | 720 | > th | dose independent | sin | 15 | NA |
| 120 | 199.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 127 | 200.05 | radiation | 10 | 720 | < th | dose dependent | sin | 14 | NA |
| 128 | 200.06 | radiation | 10 | 720 | > th | dose independent | rect. | 15 | 17 |
| 129 | 200.06 | humidity | 50 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 209 | 201.67 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 2 |
| 257 | 202.21 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 22 |
| 284 | 202.61 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 288 | 202.65 | humidity | 90 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 290 | 202.66 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 308 | 202.84 | radiation | 20 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 333 | 203.08 | humidity | 90 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 394 | 203.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 441 | 204.09 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 442 | 204.10 | humidity | 80 | 720 | < th | dose dependent | no | NA | NA |
| 511 | 204.44 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 522 | 204.52 | humidity | 70 | 720 | < th | dose independent | rect. | 9 | 23 |
| 554 | 204.78 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 588 | 205.14 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 596 | 205.22 | humidity | 90 | 90 | < th | dose dependent | sin | 16 | NA |
| 626 | 205.39 | radiation | 1 | 720 | > th | dose dependent | sin | 13 | NA |
| 637 | 205.53 | humidity | 70 | 720 | < th | dose independent | rect. | 9 | 11 |
| 649 | 205.53 | radiation | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 674 | 205.61 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 23 |
| 699 | 205.81 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 711 | 205.85 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 16 |
| 745 | 206.02 | humidity | 70 | 720 | > th | dose independent | no | NA | NA |
| 757 | 206.10 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 7 |
| 769 | 206.15 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 793 | 206.24 | humidity | 70 | 720 | < th | dose independent | no | NA | NA |
| 794 | 206.24 | humidity | 70 | 720 | < th | dose independent | rect. | 6 | 14 |
| 850 | 206.24 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 900 | 206.47 | radiation | 1 | 720 | < th | dose independent | sin | 14 | NA |
| 999 | 207.13 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |