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Os04g0643300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 3-ketoacyl carrier protein synthase III.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0166) R2 : 0.0405
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.153 (0.0349) R2dN8 : 0.0523 R2N8 : 0.0405
σ : 0.312
deviance : 44.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.42 0.276 10.5 0.124 0.201 -0.405 0.101 -0.893 -0.222 20.2 -0.07882 11021 -- --
34.2 0.272 10.5 0.118 0.204 -0.534 0.128 -- -0.247 20.1 0.315 12732 -- --
34.22 0.272 10.5 0.104 0.198 -0.427 -- -0.777 -0.223 20.2 -0.1967 12732 -- --
34.23 0.272 10.5 0.114 0.205 -0.549 -- -- -0.249 20.2 0.3137 12732 -- --
36.34 0.281 10.5 0.0888 -- -0.467 -- -0.617 -0.236 -- -0.0536 12734 -- --
42.46 0.305 10.5 0.00558 0.202 -- 0.117 -- -0.151 20.2 -- -- -- --
42.5 0.305 10.5 0.00192 0.202 -- -- -- -0.151 20.3 -- -- -- --
36.48 0.281 10.5 0.119 -- -0.546 -- -- -0.254 -- 0.3017 12732 -- --
34.48 0.273 10.5 -- 0.198 -0.525 -- -- -0.254 20.3 0.2322 12746 -- --
44.76 0.313 10.5 0.000553 -- -- -- -- -0.153 -- -- -- -- --
42.5 0.305 10.5 -- 0.202 -- -- -- -0.151 20.3 -- -- -- --
36.69 0.282 10.5 -- -- -0.522 -- -- -0.267 -- 0.2225 12732 -- --
44.76 0.312 10.5 -- -- -- -- -- -0.153 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.55 precipitation 1e-01 43200 > th dose dependent rect. 15 6
4 32.89 precipitation 1e-01 43200 > th dose dependent rect. 13 8
6 32.94 precipitation 1e-01 43200 > th dose independent rect. 19 2
7 32.95 precipitation 1e-01 43200 > th dose independent rect. 16 2
8 32.95 precipitation 1e-01 43200 < th dose independent rect. 16 2
9 32.95 precipitation 1e-01 43200 < th dose dependent rect. 16 2
12 33.02 precipitation 1e-01 43200 < th dose independent rect. 19 2
13 33.02 precipitation 1e-01 43200 < th dose dependent rect. 19 2
14 33.06 precipitation 1e-01 43200 > th dose dependent rect. 13 5
16 33.15 wind 1e+00 43200 < th dose dependent rect. 24 9
26 33.29 wind 3e+00 43200 > th dose dependent rect. 6 1
28 33.31 precipitation 1e-01 43200 < th dose independent rect. 17 4
29 33.31 precipitation 1e-01 43200 < th dose dependent rect. 17 4
32 33.34 precipitation 1e-01 43200 > th dose independent rect. 17 4
39 33.44 wind 3e+00 43200 > th dose dependent rect. 18 14
41 33.47 wind 1e+00 43200 < th dose dependent sin 7 NA
49 33.53 wind 9e+00 43200 < th dose dependent rect. 20 12
53 33.55 precipitation 1e-01 43200 > th dose dependent rect. 20 1
57 33.56 wind 1e+00 43200 > th dose dependent rect. 20 12
58 33.57 wind 9e+00 43200 < th dose dependent rect. 5 3
79 33.68 wind 3e+00 43200 > th dose dependent rect. 17 16
98 33.77 precipitation 1e-01 14400 < th dose independent rect. 5 18
102 33.77 precipitation 1e-01 14400 < th dose dependent rect. 5 18
103 33.78 precipitation 1e-01 14400 > th dose independent rect. 5 18
110 33.80 radiation 1e+01 43200 > th dose independent rect. 8 2
124 33.82 humidity 7e+01 1440 > th dose independent rect. 16 20
125 33.82 wind 9e+00 43200 < th dose dependent sin 9 NA
132 33.83 wind 3e+00 43200 > th dose dependent sin 11 NA
140 33.84 wind 1e+00 43200 < th dose independent rect. 24 9
147 33.84 wind 1e+00 43200 < th dose dependent rect. 3 10
188 33.89 wind 1e+00 43200 > th dose dependent sin 9 NA
193 33.90 wind 3e+00 43200 > th dose independent rect. 5 3
194 33.90 radiation 1e+01 43200 > th dose independent rect. 7 4
208 33.91 wind 1e+00 43200 < th dose independent rect. 23 5
209 33.91 wind 1e+00 43200 > th dose independent rect. 24 9
275 33.98 wind 1e+00 43200 < th dose dependent rect. 5 1
282 33.99 precipitation 1e-01 14400 < th dose independent sin 21 NA
285 33.99 precipitation 1e-01 14400 < th dose dependent sin 21 NA
290 34.00 precipitation 1e-01 14400 > th dose independent sin 21 NA
333 34.04 wind 3e+00 43200 < th dose independent rect. 5 3
360 34.07 humidity 7e+01 1440 > th dose independent rect. 16 2
365 34.07 precipitation 1e-01 14400 < th dose independent rect. 6 12
374 34.07 precipitation 1e-01 14400 < th dose dependent rect. 6 12
383 34.08 precipitation 1e-01 14400 > th dose independent rect. 6 12
416 34.10 precipitation 1e-01 14400 > th dose independent rect. 14 9
417 34.10 precipitation 1e-01 14400 < th dose independent rect. 14 9
421 34.10 precipitation 1e-01 14400 < th dose dependent rect. 14 9
427 34.10 precipitation 1e-01 14400 > th dose dependent rect. 5 20
442 34.12 precipitation 1e-01 14400 < th dose independent rect. 8 10
443 34.12 wind 3e+00 43200 > th dose independent rect. 21 11
454 34.12 precipitation 1e-01 14400 < th dose dependent rect. 8 10
462 34.13 wind 1e+00 43200 < th dose independent sin 9 NA
465 34.13 precipitation 1e-01 14400 > th dose independent rect. 8 10
508 34.15 precipitation 1e-01 14400 > th dose dependent rect. 8 17
532 34.17 wind 1e+00 14400 > th dose independent rect. 1 5
541 34.17 humidity 7e+01 1440 < th dose independent rect. 16 21
558 34.18 humidity 8e+01 43200 < th dose independent rect. 22 1
577 34.19 atmosphere 1e+03 43200 < th dose independent rect. 3 2
579 34.19 atmosphere 1e+03 43200 > th dose independent rect. 21 8
580 34.19 atmosphere 1e+03 43200 < th dose independent rect. 21 8
599 34.20 atmosphere 1e+03 43200 > th dose independent rect. 3 2
609 34.20 wind 1e+00 43200 < th dose independent rect. 21 13
680 34.24 wind 3e+00 43200 > th dose independent rect. 4 8
687 34.24 precipitation 1e-01 14400 > th dose dependent sin 0 NA
700 34.25 humidity 7e+01 1440 < th dose independent rect. 16 2
712 34.25 precipitation 1e-01 43200 > th dose dependent rect. 13 11
721 34.26 wind 3e+00 43200 > th dose independent rect. 5 6
746 34.27 wind 1e+00 43200 < th dose independent rect. 19 15
751 34.27 wind 7e+00 43200 < th dose dependent rect. 1 7
775 34.29 atmosphere 1e+03 43200 > th dose independent rect. 22 3
801 34.30 wind 3e+00 43200 > th dose independent sin 7 NA
806 34.30 atmosphere 1e+03 43200 > th dose independent rect. 20 5
835 34.31 atmosphere 1e+03 43200 > th dose independent rect. 20 3
836 34.31 atmosphere 1e+03 43200 < th dose independent rect. 20 3
871 34.32 atmosphere 1e+03 43200 < th dose independent rect. 22 3
961 34.36 humidity 8e+01 43200 > th dose independent rect. 23 1
992 34.37 wind 3e+00 43200 < th dose independent rect. 4 8