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Os04g0643100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0139) R2 : 0.00665
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0511 (0.0292) R2dN8 : 0.00859 R2N8 : 0.00665
σ : 0.262
deviance : 31.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.79 0.192 11.9 -0.614 0.26 0.983 -0.154 2.59 -0.13 6.41 19.15 5055 -- --
17.27 0.195 11.9 -0.667 0.262 -0.426 -0.174 -- -0.143 6.19 19.15 5055 -- --
16.79 0.191 11.9 -0.612 0.26 1.09 -- 2.81 -0.128 6.49 18.68 4988 -- --
17.34 0.195 11.9 -0.668 0.261 -0.424 -- -- -0.142 6.32 19.15 5055 -- --
20.28 0.21 11.9 -0.58 -- 1.4 -- 3.52 -0.12 -- 18.31 4948 -- --
18.12 0.2 11.9 -0.611 0.26 -- -0.166 -- -0.124 6.43 -- -- -- --
18.19 0.2 11.9 -0.613 0.259 -- -- -- -0.124 6.55 -- -- -- --
20.82 0.213 11.9 -0.636 -- -0.63 -- -- -0.137 -- 14.77 1657 -- --
20.32 0.21 11.8 -- 0.235 0.464 -- -- 0.0367 7.42 22.2 31871 -- --
21.68 0.218 11.9 -0.607 -- -- -- -- -0.118 -- -- -- -- --
28.1 0.248 11.9 -- 0.251 -- -- -- -0.0554 6.69 -- -- -- --
22.62 0.222 11.8 -- -- 0.476 -- -- 0.0915 -- 36.06 47520 -- --
31.4 0.262 11.9 -- -- -- -- -- -0.0511 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.94 humidity 90.0 14400 < th dose independent rect. 4 2
2 16.21 temperature 20.0 720 > th dose independent rect. 19 4
3 16.22 humidity 90.0 14400 < th dose independent rect. 3 4
6 16.30 humidity 70.0 43200 < th dose independent rect. 8 1
7 16.31 temperature 15.0 90 > th dose dependent rect. 19 14
10 16.35 wind 1.0 14400 < th dose dependent rect. 1 2
11 16.37 temperature 15.0 270 > th dose independent rect. 18 13
16 16.43 humidity 70.0 43200 < th dose independent rect. 3 6
18 16.44 humidity 70.0 43200 < th dose independent rect. 5 4
23 16.46 radiation 30.0 43200 > th dose independent rect. 15 17
24 16.47 wind 9.0 1440 < th dose independent rect. 24 7
26 16.47 temperature 20.0 720 > th dose independent rect. 12 11
28 16.48 wind 1.0 43200 > th dose independent rect. 22 1
30 16.49 humidity 70.0 43200 < th dose dependent rect. 8 1
31 16.49 radiation 1.0 1440 < th dose dependent rect. 12 4
34 16.50 wind 1.0 43200 < th dose independent rect. 22 1
35 16.50 humidity 70.0 43200 > th dose independent rect. 7 2
38 16.51 humidity 70.0 43200 > th dose independent rect. 4 5
42 16.52 humidity 50.0 43200 > th dose independent rect. 14 1
52 16.53 wind 7.0 4320 > th dose independent rect. 17 7
53 16.53 wind 7.0 4320 < th dose independent rect. 17 7
55 16.54 wind 1.0 43200 < th dose independent rect. 15 1
56 16.54 humidity 90.0 14400 > th dose independent rect. 5 1
60 16.54 humidity 90.0 720 < th dose independent rect. 11 7
62 16.55 temperature 15.0 14400 > th dose independent rect. 2 1
67 16.55 humidity 90.0 14400 < th dose dependent rect. 1 1
72 16.56 humidity 70.0 14400 > th dose dependent rect. 1 6
75 16.57 humidity 80.0 14400 > th dose dependent rect. 3 4
76 16.57 humidity 50.0 14400 > th dose dependent rect. 1 6
78 16.58 temperature 15.0 14400 < th dose independent rect. 2 1
86 16.59 radiation 1.0 1440 < th dose independent rect. 13 2
98 16.59 humidity 80.0 14400 > th dose dependent rect. 5 1
113 16.61 radiation 10.0 43200 > th dose independent rect. 15 1
114 16.61 radiation 10.0 43200 > th dose independent rect. 15 3
123 16.61 temperature 20.0 720 > th dose independent rect. 15 8
130 16.61 precipitation 0.1 1440 > th dose independent rect. 10 11
139 16.61 humidity 90.0 14400 < th dose dependent rect. 24 3
151 16.62 temperature 20.0 90 > th dose independent rect. 5 18
152 16.62 wind 1.0 43200 < th dose dependent rect. 15 1
155 16.62 wind 1.0 43200 < th dose dependent rect. 6 5
156 16.62 humidity 70.0 43200 < th dose dependent rect. 4 5
161 16.62 humidity 60.0 43200 < th dose dependent rect. 5 10
168 16.63 radiation 30.0 43200 > th dose independent rect. 15 2
189 16.63 precipitation 0.1 1440 > th dose independent rect. 8 18
190 16.63 precipitation 0.1 1440 < th dose independent rect. 7 19
192 16.63 humidity 60.0 43200 < th dose dependent rect. 11 2
198 16.63 humidity 60.0 43200 < th dose dependent rect. 9 5
227 16.63 precipitation 0.1 1440 < th dose dependent rect. 7 19
231 16.64 radiation 1.0 1440 < th dose independent rect. 10 5
240 16.64 wind 1.0 14400 < th dose dependent rect. 5 1
252 16.65 humidity 90.0 1440 < th dose independent rect. 13 4
260 16.65 precipitation 0.1 1440 < th dose independent rect. 7 17
261 16.65 precipitation 0.1 1440 < th dose independent rect. 9 17
263 16.65 wind 9.0 4320 > th dose dependent rect. 18 3
280 16.65 precipitation 0.1 1440 < th dose dependent rect. 7 17
281 16.65 precipitation 0.1 1440 < th dose dependent rect. 9 17
285 16.66 precipitation 0.1 1440 > th dose independent sin 20 NA
286 16.66 humidity 50.0 43200 < th dose independent rect. 14 1
296 16.66 temperature 15.0 1440 > th dose independent rect. 6 11
299 16.66 humidity 50.0 43200 > th dose independent rect. 4 13
313 16.66 humidity 60.0 43200 < th dose dependent sin 7 NA
330 16.67 precipitation 0.1 1440 > th dose independent rect. 10 3
335 16.67 humidity 50.0 43200 > th dose independent rect. 10 7
343 16.67 humidity 50.0 43200 > th dose independent rect. 7 10
347 16.67 humidity 50.0 43200 > th dose independent rect. 5 11
359 16.67 precipitation 0.1 1440 < th dose independent rect. 9 15
368 16.67 humidity 50.0 43200 > th dose independent rect. 11 19
383 16.67 precipitation 0.1 1440 > th dose dependent rect. 10 3
384 16.67 wind 7.0 4320 > th dose dependent rect. 17 7
387 16.67 precipitation 0.1 1440 < th dose dependent rect. 9 15
394 16.68 humidity 50.0 43200 > th dose independent sin 21 NA
400 16.68 wind 1.0 43200 > th dose independent rect. 15 1
402 16.68 radiation 1.0 1440 > th dose independent rect. 13 1
473 16.68 humidity 50.0 14400 > th dose dependent rect. 5 1
488 16.69 precipitation 0.1 1440 < th dose independent sin 20 NA
489 16.69 wind 7.0 4320 < th dose independent rect. 19 1
499 16.69 temperature 15.0 14400 > th dose independent rect. 20 7
502 16.69 humidity 90.0 1440 > th dose independent rect. 11 7
524 16.69 precipitation 0.1 1440 < th dose independent rect. 9 12
577 16.69 humidity 50.0 43200 > th dose independent rect. 4 23
589 16.69 precipitation 0.1 1440 < th dose dependent sin 20 NA
590 16.69 humidity 50.0 14400 > th dose dependent rect. 1 1
597 16.69 humidity 50.0 14400 > th dose dependent rect. 3 3
604 16.69 precipitation 0.1 1440 < th dose dependent rect. 9 12
612 16.70 humidity 50.0 43200 > th dose independent no NA NA
613 16.70 radiation 1.0 14400 < th dose independent rect. 9 1
615 16.70 radiation 1.0 1440 > th dose independent rect. 11 4
710 16.70 radiation 40.0 90 < th dose dependent rect. 23 13
720 16.71 humidity 90.0 1440 > th dose independent rect. 13 5
746 16.71 temperature 20.0 14400 < th dose dependent rect. 6 1
750 16.71 radiation 40.0 43200 > th dose dependent rect. 14 2
755 16.71 wind 1.0 14400 < th dose dependent rect. 1 5
768 16.71 temperature 20.0 720 < th dose dependent rect. 10 13
831 16.72 humidity 50.0 43200 < th dose independent rect. 4 11
873 16.72 humidity 50.0 43200 < th dose independent rect. 17 22
876 16.72 wind 1.0 43200 < th dose dependent rect. 22 1
893 16.72 temperature 20.0 720 < th dose dependent rect. 11 10
916 16.73 temperature 15.0 14400 > th dose independent sin 12 NA
918 16.73 humidity 50.0 43200 < th dose independent sin 0 NA
923 16.73 wind 7.0 4320 > th dose independent rect. 19 1
924 16.73 radiation 1.0 14400 > th dose independent rect. 9 1
995 16.73 humidity 50.0 43200 < th dose independent rect. 11 19