Os04g0642100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Microtubule-associated protein EB1.
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Os04g0642100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Microtubule-associated protein EB1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.74 | 0.494 | 6.72 | -0.0138 | 1.23 | 0.798 | -0.0726 | -0.764 | 0.103 | 13.2 | 1012 | 9170 | -- | -- |
| 111.49 | 0.492 | 6.7 | 0.163 | 1.24 | 0.857 | -0.0946 | -- | 0.153 | 13.2 | 1013 | 9175 | -- | -- |
| 109.4 | 0.487 | 6.73 | 0.00691 | 1.23 | 0.767 | -- | -0.609 | 0.103 | 12.9 | 1013 | 9634 | -- | -- |
| 110.57 | 0.49 | 6.69 | 0.199 | 1.24 | 0.91 | -- | -- | 0.169 | 13.2 | 1014 | 9079 | -- | -- |
| 201.18 | 0.661 | 6.74 | -0.099 | -- | 0.846 | -- | -0.974 | 0.0671 | -- | 1015 | 7269 | -- | -- |
| 143.17 | 0.561 | 6.64 | 0.624 | 1.23 | -- | -0.179 | -- | 0.403 | 13.2 | -- | -- | -- | -- |
| 143.3 | 0.561 | 6.64 | 0.617 | 1.23 | -- | -- | -- | 0.402 | 13.1 | -- | -- | -- | -- |
| 204.81 | 0.667 | 6.71 | 0.17 | -- | 0.917 | -- | -- | 0.153 | -- | 1014 | 8581 | -- | -- |
| 111.52 | 0.492 | 6.71 | -- | 1.24 | 0.954 | -- | -- | 0.13 | 13.1 | 1014 | 8620 | -- | -- |
| 236.72 | 0.719 | 6.66 | 0.57 | -- | -- | -- | -- | 0.377 | -- | -- | -- | -- | -- |
| 153.34 | 0.579 | 6.66 | -- | 1.22 | -- | -- | -- | 0.333 | 13.1 | -- | -- | -- | -- |
| 205.04 | 0.667 | 6.72 | -- | -- | 1.01 | -- | -- | 0.133 | -- | 1014 | 7243 | -- | -- |
| 245.3 | 0.731 | 6.67 | -- | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.88 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 2 | 110.02 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 7 | 111.03 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 8 | 111.08 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 11 | 111.16 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 12 | 111.16 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 16 | 111.23 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 19 | 111.29 | humidity | 50 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 20 | 111.29 | wind | 5 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 35 | 111.60 | wind | 5 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 37 | 111.61 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 50 | 111.75 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 59 | 111.82 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 62 | 111.84 | wind | 7 | 14400 | > th | dose independent | sin | 20 | NA |
| 66 | 111.84 | wind | 3 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 79 | 111.91 | wind | 9 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 95 | 111.96 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 99 | 111.98 | wind | 7 | 14400 | < th | dose independent | sin | 20 | NA |
| 114 | 112.02 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 134 | 112.10 | temperature | 15 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 140 | 112.11 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 171 | 112.19 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 175 | 112.20 | temperature | 15 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 187 | 112.23 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 207 | 112.28 | wind | 7 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 208 | 112.28 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 224 | 112.30 | temperature | 15 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 247 | 112.33 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 250 | 112.33 | temperature | 15 | 14400 | < th | dose dependent | rect. | 22 | 14 |
| 264 | 112.37 | temperature | 15 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 268 | 112.38 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 287 | 112.41 | wind | 3 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 304 | 112.43 | temperature | 15 | 14400 | < th | dose dependent | sin | 6 | NA |
| 320 | 112.45 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 340 | 112.47 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 348 | 112.48 | wind | 5 | 14400 | > th | dose dependent | sin | 20 | NA |
| 373 | 112.50 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 399 | 112.52 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 535 | 112.66 | temperature | 15 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 621 | 112.73 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 702 | 112.80 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 749 | 112.83 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 777 | 112.85 | temperature | 15 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 815 | 112.88 | temperature | 15 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 842 | 112.91 | temperature | 15 | 14400 | < th | dose dependent | no | NA | NA |
| 927 | 112.98 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 984 | 113.03 | temperature | 15 | 14400 | < th | dose dependent | rect. | 1 | 1 |