Os04g0639300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0639300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 473.11 | 1.02 | 9.85 | -1.78 | 1.51 | 2.32 | 0.38 | 1.38 | -2.17 | 8.2 | 70.04 | 7081 | -- | -- |
| 475.98 | 1.02 | 9.85 | -1.87 | 1.51 | 2.38 | 0.334 | -- | -2.19 | 8.17 | 70 | 7096 | -- | -- |
| 473.52 | 1.01 | 9.85 | -1.77 | 1.51 | 2.31 | -- | 1.36 | -2.17 | 8.15 | 70.13 | 7091 | -- | -- |
| 476.21 | 1.02 | 9.84 | -1.87 | 1.51 | 2.4 | -- | -- | -2.21 | 8.13 | 70.06 | 7091 | -- | -- |
| 596.55 | 1.14 | 9.86 | -1.76 | -- | 2.32 | -- | 1.15 | -2.16 | -- | 70 | 7193 | -- | -- |
| 569.32 | 1.12 | 9.74 | -2.1 | 1.51 | -- | 0.254 | -- | -1.76 | 7.92 | -- | -- | -- | -- |
| 569.5 | 1.12 | 9.74 | -2.1 | 1.51 | -- | -- | -- | -1.76 | 7.9 | -- | -- | -- | -- |
| 598.87 | 1.14 | 9.88 | -1.84 | -- | 2.39 | -- | -- | -2.2 | -- | 70.17 | 7191 | -- | -- |
| 562.65 | 1.1 | 9.83 | -- | 1.74 | 2.55 | -- | -- | -2.16 | 8.16 | 71 | 7855 | -- | -- |
| 693.53 | 1.23 | 9.78 | -2.08 | -- | -- | -- | -- | -1.74 | -- | -- | -- | -- | -- |
| 685.24 | 1.22 | 9.69 | -- | 1.5 | -- | -- | -- | -1.53 | 8 | -- | -- | -- | -- |
| 666.4 | 1.2 | 9.8 | -- | -- | 2.74 | -- | -- | -1.84 | -- | 64.34 | 17276 | -- | -- |
| 807.55 | 1.33 | 9.73 | -- | -- | -- | -- | -- | -1.51 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 467.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 2 | 467.39 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 3 | 468.55 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 468.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 5 | 468.86 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 6 | 468.93 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 11 | 469.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 12 | 469.13 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 13 | 469.14 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 22 | 469.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 23 | 469.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 28 | 469.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 36 | 469.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 37 | 469.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 44 | 470.00 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 49 | 470.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 55 | 470.37 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 58 | 470.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 84 | 471.05 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 117 | 471.66 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 131 | 471.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 138 | 471.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 154 | 472.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 161 | 472.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 179 | 472.58 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 182 | 472.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 183 | 472.60 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 184 | 472.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 239 | 473.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 248 | 473.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 250 | 473.31 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 264 | 473.37 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 279 | 473.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 289 | 473.65 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 359 | 474.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 362 | 474.06 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 377 | 474.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 378 | 474.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 483 | 474.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 539 | 475.25 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 566 | 475.46 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 728 | 476.23 | humidity | 80.0 | 14400 | < th | dose dependent | no | NA | NA |
| 747 | 476.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 751 | 476.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 781 | 476.58 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 795 | 476.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 799 | 476.77 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 802 | 476.79 | humidity | 60.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 809 | 476.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 810 | 476.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 855 | 477.06 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 902 | 477.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 904 | 477.41 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 923 | 477.53 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 927 | 477.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 946 | 477.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 948 | 477.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 953 | 477.64 | humidity | 70.0 | 14400 | > th | dose independent | sin | 11 | NA |