Os04g0639200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0639200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.58 | 0.657 | 12.8 | -0.145 | 0.185 | 0.164 | 1.6 | 4.98 | -0.331 | 14.4 | 20.32 | 5336 | -- | -- |
| 204.34 | 0.666 | 12.7 | -0.134 | 0.0676 | -1.43 | 1.41 | -- | -0.297 | 11.8 | 18.01 | 10628 | -- | -- |
| 204.26 | 0.666 | 12.8 | -0.112 | 0.226 | 0.232 | -- | 5.24 | -0.326 | 16.3 | 20.36 | 5337 | -- | -- |
| 209.34 | 0.674 | 12.7 | -0.152 | 0.229 | -1.79 | -- | -- | -0.305 | 15.3 | 18 | 9555 | -- | -- |
| 207 | 0.67 | 12.8 | -0.118 | -- | 0.261 | -- | 5.27 | -0.33 | -- | 20.39 | 5330 | -- | -- |
| 229.36 | 0.71 | 12.6 | 0.648 | 0.166 | -- | 1.77 | -- | -0.0625 | 14.4 | -- | -- | -- | -- |
| 240.14 | 0.726 | 12.6 | 0.696 | 0.209 | -- | -- | -- | -0.0507 | 16.5 | -- | -- | -- | -- |
| 210.66 | 0.676 | 12.6 | -0.0347 | -- | -2.08 | -- | -- | -0.251 | -- | 16.65 | 8149 | -- | -- |
| 207.85 | 0.671 | 12.7 | -- | 0.177 | -2.34 | -- | -- | -0.295 | 15.1 | 17.23 | 6843 | -- | -- |
| 242.47 | 0.728 | 12.6 | 0.688 | -- | -- | -- | -- | -0.0562 | -- | -- | -- | -- | -- |
| 252.92 | 0.744 | 12.6 | -- | 0.196 | -- | -- | -- | -0.128 | 16.6 | -- | -- | -- | -- |
| 210.33 | 0.675 | 12.6 | -- | -- | -2.31 | -- | -- | -0.244 | -- | 16.9 | 6826 | -- | -- |
| 254.96 | 0.745 | 12.6 | -- | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.43 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 2 | 188.43 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 3 | 189.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 4 | 190.12 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 12 | 192.91 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 13 | 192.91 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 17 | 193.28 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 22 | 193.58 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 24 | 193.58 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 43 | 194.75 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 45 | 194.81 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 53 | 195.01 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 64 | 195.16 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 65 | 195.18 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 66 | 195.18 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 69 | 195.22 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 70 | 195.22 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 75 | 195.25 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 78 | 195.29 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 103 | 195.40 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 166 | 195.72 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 229 | 195.93 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 260 | 196.05 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 272 | 196.10 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 304 | 196.20 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 20 |
| 311 | 196.23 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 5 |
| 354 | 196.33 | humidity | 50.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 372 | 196.36 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 460 | 196.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 477 | 196.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 508 | 196.65 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 17 |
| 515 | 196.66 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 518 | 196.67 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 530 | 196.70 | temperature | 20.0 | 4320 | < th | dose dependent | no | NA | NA |
| 533 | 196.71 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 543 | 196.72 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 584 | 196.80 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 585 | 196.80 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 593 | 196.80 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 596 | 196.80 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 7 | 23 |
| 642 | 196.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 671 | 196.91 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 715 | 196.95 | humidity | 50.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 716 | 196.95 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 797 | 197.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 810 | 197.09 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 833 | 197.13 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 923 | 197.24 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 944 | 197.25 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 19 |