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Os04g0635100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.64 (0.0635) R2 : 0.543
β1 : 1.61 (0.231) R2dD : 0.0504 R2D : 0.0296
β2 : 4.48 (0.257) R2dC : 0.876 R2C : -0.897
β3 : 4.27 (0.195) R2dE : 1.37 R2E : -0.396
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.495 (0.135) R2dN8 : 0.0181 R2N8 : 0.00102
σ : 1.18
deviance : 644.05
__
_____
C
peak time of C : 10.4
E
wheather : humidity
threshold : 63.09
memory length : 67
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 18
open length of G : 11.3

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
642.82 1.19 6.63 1.62 4.51 4.35 0.711 1.5 0.554 10.5 61.25 77 18 11.2
641.88 1.18 6.64 1.64 4.47 4.29 -0.862 -- 0.515 10.4 62.07 70 18 11.3
639.99 1.18 6.62 1.67 4.52 4.35 -- 1.28 0.516 10.4 62 69 18 11.3
644.05 1.18 6.64 1.61 4.48 4.27 -- -- 0.495 10.4 63.09 67 18 11.3
887.01 1.39 6.68 1.74 -- 3.18 -- 2.09 0.632 -- 64 637 17 12.4
942.34 1.44 6.73 1.62 2.66 -- 0.805 -- 0.467 4.57 -- -- -- --
944.07 1.44 6.73 1.62 2.66 -- -- -- 0.463 4.58 -- -- -- --
863.98 1.37 6.8 1.66 -- 3.33 -- -- 0.345 -- 64.79 658 15.8 13.5
712.21 1.24 6.68 -- 4.45 4.25 -- -- 0.315 10.4 63.37 65 18 11.3
1321.66 1.7 6.75 1.72 -- -- -- -- 0.533 -- -- -- -- --
1013.12 1.49 6.77 -- 2.69 -- -- -- 0.283 4.57 -- -- -- --
934.71 1.42 6.83 -- -- 3.32 -- -- 0.202 -- 66 644 15.8 13.7
1399.81 1.75 6.79 -- -- -- -- -- 0.342 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 652.73 humidity 60.0 90 > th dose independent rect. 18 11
2 655.55 radiation 1.0 90 < th dose independent rect. 18 11
3 659.76 precipitation 0.1 90 < th dose independent rect. 5 13
4 659.76 precipitation 0.1 90 < th dose dependent rect. 5 13
5 661.71 temperature 10.0 1440 > th dose independent rect. 19 11
8 661.71 temperature 30.0 1440 < th dose independent rect. 19 11
12 661.71 humidity 50.0 1440 > th dose independent rect. 19 11
14 661.71 atmosphere 995.0 1440 > th dose independent rect. 19 11
15 661.71 radiation 20.0 1440 < th dose independent rect. 19 11
24 661.71 temperature 10.0 1440 > th dose independent rect. 6 13
27 670.12 radiation 10.0 90 < th dose dependent rect. 18 11
31 673.19 temperature 30.0 90 < th dose independent rect. 18 11
33 673.77 temperature 30.0 90 < th dose independent rect. 18 2
36 675.32 temperature 10.0 90 > th dose independent rect. 18 11
41 675.32 temperature 10.0 90 > th dose independent rect. 5 13
42 675.32 atmosphere 1015.0 90 < th dose independent rect. 5 13
43 675.47 atmosphere 995.0 90 > th dose independent rect. 18 11
44 676.24 wind 9.0 90 < th dose independent rect. 18 11
45 676.54 wind 9.0 90 < th dose independent rect. 5 13
48 680.96 wind 1.0 90 > th dose independent rect. 4 14
49 686.02 wind 9.0 270 < th dose independent rect. 20 11
50 686.17 humidity 50.0 90 > th dose dependent rect. 18 2
51 686.27 humidity 70.0 270 > th dose independent rect. 20 11
52 686.67 radiation 30.0 270 < th dose independent rect. 20 11
53 686.77 temperature 10.0 270 > th dose independent rect. 20 11
54 686.77 temperature 30.0 270 < th dose independent rect. 20 11
55 686.77 humidity 50.0 270 > th dose independent rect. 20 11
57 686.77 atmosphere 995.0 270 > th dose independent rect. 20 11
59 686.77 temperature 10.0 270 > th dose independent rect. 7 13
60 686.77 atmosphere 1015.0 270 < th dose independent rect. 7 13
66 690.34 temperature 10.0 1440 > th dose independent rect. 15 4
70 690.34 temperature 10.0 1440 > th dose independent rect. 19 20
73 690.89 humidity 60.0 90 > th dose independent rect. 18 2
74 691.48 radiation 1.0 90 < th dose independent sin 15 NA
75 692.52 radiation 40.0 270 < th dose dependent rect. 20 11
76 692.96 radiation 1.0 90 > th dose independent sin 15 NA
82 696.54 precipitation 0.1 90 < th dose independent rect. 14 4
83 696.54 precipitation 0.1 90 < th dose dependent rect. 14 4
87 697.73 radiation 1.0 90 < th dose dependent sin 16 NA
88 697.75 radiation 10.0 720 < th dose independent rect. 17 3
90 698.34 radiation 1.0 90 < th dose dependent rect. 18 2
96 701.90 radiation 1.0 90 < th dose independent rect. 18 2
102 704.45 temperature 15.0 90 > th dose independent rect. 18 20
103 704.83 precipitation 0.1 90 < th dose independent rect. 18 11
104 704.83 precipitation 0.1 90 < th dose dependent rect. 18 11
105 705.25 precipitation 0.1 270 < th dose independent rect. 20 11
106 705.25 precipitation 0.1 270 < th dose dependent rect. 20 11
107 705.29 atmosphere 1010.0 90 < th dose independent rect. 18 11
108 705.38 wind 9.0 270 < th dose independent rect. 7 13
109 705.54 humidity 50.0 14400 > th dose independent rect. 19 3
110 705.75 wind 1.0 270 > th dose independent rect. 14 1
111 706.13 temperature 10.0 90 > th dose dependent rect. 14 4
114 706.72 radiation 1.0 1440 < th dose dependent rect. 19 3
116 706.80 radiation 20.0 720 < th dose dependent rect. 17 3
121 708.01 wind 1.0 90 > th dose independent rect. 13 5
123 708.49 atmosphere 995.0 90 > th dose dependent rect. 19 1
125 708.55 wind 9.0 90 < th dose independent rect. 14 4
126 708.72 wind 9.0 270 < th dose independent rect. 14 1
128 709.00 humidity 50.0 720 > th dose independent rect. 17 3
130 709.15 wind 9.0 90 < th dose independent rect. 20 23
131 709.21 temperature 10.0 270 > th dose independent rect. 14 1
133 709.21 atmosphere 1010.0 270 < th dose independent rect. 14 1
135 709.21 temperature 10.0 270 > th dose independent rect. 15 23
136 709.46 temperature 15.0 1440 > th dose independent rect. 19 3
139 709.85 precipitation 0.1 270 < th dose independent rect. 14 1
140 709.85 precipitation 0.1 270 < th dose dependent rect. 14 1
142 710.02 temperature 10.0 90 > th dose independent rect. 19 1
147 710.02 atmosphere 995.0 90 > th dose independent rect. 19 1
148 710.02 atmosphere 1010.0 90 < th dose independent rect. 19 1
155 710.02 temperature 10.0 90 > th dose independent rect. 20 23
161 710.04 wind 1.0 90 > th dose independent rect. 19 1
163 710.05 temperature 10.0 90 > th dose independent rect. 14 4
165 710.05 atmosphere 1010.0 90 < th dose independent rect. 14 4
169 710.16 precipitation 0.1 90 < th dose independent rect. 20 23
171 710.16 precipitation 0.1 90 < th dose dependent rect. 20 23
172 710.20 atmosphere 995.0 90 > th dose independent rect. 18 20
173 710.22 wind 9.0 90 < th dose independent rect. 19 1
186 710.64 temperature 30.0 1440 < th dose independent rect. 19 3
190 710.64 humidity 50.0 1440 > th dose independent rect. 19 3
192 710.64 atmosphere 995.0 1440 > th dose independent rect. 19 3
193 710.64 radiation 1.0 1440 < th dose independent rect. 19 3
213 710.64 temperature 10.0 1440 > th dose independent rect. 22 21
218 711.25 radiation 40.0 43200 < th dose dependent rect. 19 3
219 711.26 wind 9.0 90 < th dose independent rect. 18 20
228 711.88 radiation 1.0 270 > th dose independent rect. 14 1
229 711.91 atmosphere 1015.0 1440 < th dose independent rect. 15 4
230 712.04 radiation 40.0 90 < th dose independent rect. 13 5
237 713.08 temperature 10.0 270 > th dose dependent rect. 14 1
250 714.28 temperature 30.0 30 < th dose dependent rect. 18 3
278 716.84 radiation 20.0 270 < th dose independent rect. 16 11
286 718.37 radiation 1.0 90 > th dose independent rect. 14 15
289 718.95 radiation 1.0 90 > th dose independent rect. 14 5
301 719.13 atmosphere 995.0 720 > th dose independent rect. 17 3
388 723.68 precipitation 0.1 270 < th dose independent rect. 7 13
389 723.68 precipitation 0.1 270 < th dose dependent rect. 7 13
403 724.23 atmosphere 995.0 90 > th dose independent rect. 5 13
410 724.53 wind 9.0 90 < th dose dependent rect. 19 1
419 724.58 atmosphere 995.0 1440 > th dose independent rect. 19 19
424 724.86 precipitation 0.1 90 < th dose independent rect. 19 1
426 724.86 precipitation 0.1 90 < th dose dependent rect. 19 1
428 725.01 atmosphere 995.0 270 > th dose independent rect. 14 1
441 725.48 temperature 10.0 90 > th dose dependent rect. 18 11
443 725.57 atmosphere 995.0 270 > th dose independent rect. 7 13
447 725.73 humidity 50.0 270 > th dose independent rect. 14 1
448 725.96 humidity 50.0 270 > th dose independent rect. 7 13
462 727.04 humidity 50.0 90 > th dose independent rect. 18 19
466 727.59 precipitation 0.1 90 < th dose independent rect. 21 21
467 727.59 precipitation 0.1 90 < th dose dependent rect. 21 21
485 728.84 humidity 90.0 90 < th dose independent rect. 14 4
499 728.94 precipitation 0.1 90 < th dose independent rect. 18 20
500 728.94 precipitation 0.1 90 < th dose dependent rect. 18 20
514 730.17 atmosphere 1015.0 90 < th dose independent rect. 18 20
518 730.59 atmosphere 995.0 90 > th dose independent rect. 14 4
562 731.91 temperature 10.0 270 > th dose independent rect. 16 11
563 731.91 radiation 40.0 270 < th dose independent rect. 16 11
564 731.91 temperature 10.0 270 > th dose independent rect. 3 13
565 731.91 atmosphere 1015.0 270 < th dose independent rect. 3 13
570 732.03 wind 9.0 270 < th dose independent rect. 3 13
593 732.77 wind 9.0 270 < th dose independent rect. 15 22
599 733.14 radiation 40.0 270 < th dose dependent rect. 16 11
610 733.85 atmosphere 995.0 270 > th dose dependent rect. 14 1
614 734.15 temperature 10.0 90 > th dose dependent rect. 18 19
686 735.67 atmosphere 995.0 90 > th dose dependent rect. 14 4
692 736.16 radiation 40.0 720 < th dose independent rect. 5 3
693 736.16 radiation 20.0 720 < th dose dependent rect. 17 10
705 737.16 wind 9.0 720 < th dose independent rect. 5 3
706 737.16 temperature 10.0 720 > th dose independent rect. 5 3
707 737.16 temperature 30.0 720 < th dose independent rect. 5 3
708 737.16 humidity 50.0 720 > th dose independent rect. 5 3
710 737.16 atmosphere 995.0 720 > th dose independent rect. 5 3
711 737.16 atmosphere 1015.0 720 < th dose independent rect. 5 3
712 737.16 temperature 10.0 720 > th dose independent rect. 8 21
744 738.79 precipitation 0.1 720 < th dose independent rect. 5 3
745 738.79 precipitation 0.1 720 < th dose dependent rect. 5 3
778 740.21 radiation 40.0 1440 < th dose independent rect. 16 3
780 740.34 humidity 50.0 720 > th dose independent rect. 17 18
781 740.36 wind 1.0 90 > th dose dependent rect. 19 1
783 740.58 temperature 10.0 90 > th dose dependent rect. 5 13
786 740.77 wind 1.0 270 > th dose dependent rect. 14 1
803 742.08 temperature 10.0 90 > th dose dependent rect. 19 1
837 742.61 wind 9.0 270 < th dose independent rect. 16 11
853 743.42 wind 9.0 720 < th dose independent rect. 20 21
866 743.72 atmosphere 995.0 270 > th dose independent rect. 15 22
873 743.97 radiation 1.0 90 < th dose dependent rect. 11 10
881 744.14 wind 9.0 90 < th dose dependent rect. 14 4
886 744.35 wind 9.0 90 < th dose dependent rect. 18 3
898 744.97 humidity 60.0 90 > th dose independent rect. 18 5
921 745.72 temperature 30.0 30 < th dose independent rect. 18 5
944 746.97 atmosphere 995.0 270 > th dose independent rect. 16 11
978 748.14 wind 1.0 720 > th dose independent rect. 17 3