Os04g0626900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0626900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.2 | 0.279 | 8.46 | -0.2 | 0.428 | 1.02 | 0.123 | -0.477 | -0.194 | 10.1 | 10.49 | 651 | -- | -- |
| 35.35 | 0.277 | 8.45 | -0.118 | 0.426 | 1.02 | 0.197 | -- | -0.172 | 9.88 | 10.26 | 618 | -- | -- |
| 35.25 | 0.277 | 8.46 | -0.21 | 0.424 | 1.03 | -- | -0.576 | -0.198 | 9.85 | 10.83 | 617 | -- | -- |
| 35.5 | 0.277 | 8.45 | -0.109 | 0.424 | 1.02 | -- | -- | -0.172 | 9.83 | 10.14 | 616 | -- | -- |
| 38.17 | 0.289 | 8.46 | -0.0737 | -- | 0.973 | -- | -0.175 | -0.158 | -- | 10.83 | 617 | -- | -- |
| 47.71 | 0.324 | 8.42 | 0.127 | 0.252 | -- | 0.213 | -- | -0.0181 | 12.2 | -- | -- | -- | -- |
| 47.91 | 0.324 | 8.42 | 0.135 | 0.251 | -- | -- | -- | -0.0173 | 12.1 | -- | -- | -- | -- |
| 38.19 | 0.289 | 8.45 | -0.0496 | -- | 0.969 | -- | -- | -0.151 | -- | 10.83 | 617 | -- | -- |
| 35.78 | 0.279 | 8.44 | -- | 0.413 | 0.978 | -- | -- | -0.154 | 9.83 | 10.6 | 611 | -- | -- |
| 51.87 | 0.337 | 8.42 | 0.127 | -- | -- | -- | -- | -0.021 | -- | -- | -- | -- | -- |
| 48.39 | 0.325 | 8.42 | -- | 0.249 | -- | -- | -- | -0.0324 | 12.1 | -- | -- | -- | -- |
| 38.25 | 0.289 | 8.45 | -- | -- | 0.954 | -- | -- | -0.144 | -- | 10.6 | 611 | -- | -- |
| 52.3 | 0.338 | 8.43 | -- | -- | -- | -- | -- | -0.0351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 3 | 32.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 7 | 32.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 8 | 32.71 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 35 | 33.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 44 | 33.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 51 | 33.24 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 228 | 34.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 327 | 34.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 473 | 35.16 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 479 | 35.18 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 499 | 35.22 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 509 | 35.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 510 | 35.24 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 736 | 35.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 746 | 35.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 760 | 35.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 775 | 35.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 818 | 35.91 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 827 | 35.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 907 | 36.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 909 | 36.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 930 | 36.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 947 | 36.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 957 | 36.20 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |