Os04g0624400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tyrosinase family protein.
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Os04g0624400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tyrosinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 374.95 | 0.91 | 3.81 | 0.783 | 0.7 | -2.09 | 1.85 | -1.13 | -0.00116 | 8.49 | 22.1 | 959 | -- | -- |
| 378.24 | 0.906 | 3.77 | 1.14 | 0.699 | -2.08 | 2.14 | -- | 0.0867 | 8.66 | 22.2 | 973 | -- | -- |
| 385.05 | 0.914 | 3.81 | 0.739 | 0.698 | -2.11 | -- | -1.56 | -0.0166 | 8.24 | 22.1 | 960 | -- | -- |
| 393.35 | 0.924 | 3.78 | 1.18 | 0.706 | -2.05 | -- | -- | 0.0906 | 8.27 | 22.28 | 967 | -- | -- |
| 408.05 | 0.941 | 3.84 | 0.753 | -- | -2.21 | -- | -1.65 | -0.00431 | -- | 22 | 882 | -- | -- |
| 554.44 | 1.1 | 3.93 | 0.413 | 1.01 | -- | 2.12 | -- | -0.604 | 9.25 | -- | -- | -- | -- |
| 570.43 | 1.12 | 3.92 | 0.489 | 0.998 | -- | -- | -- | -0.601 | 9.31 | -- | -- | -- | -- |
| 418.14 | 0.952 | 3.79 | 1.23 | -- | -2.19 | -- | -- | 0.127 | -- | 22.11 | 900 | -- | -- |
| 426.16 | 0.961 | 3.82 | -- | 0.746 | -1.81 | -- | -- | -0.0753 | 8.33 | 22.3 | 974 | -- | -- |
| 628.51 | 1.17 | 3.95 | 0.485 | -- | -- | -- | -- | -0.597 | -- | -- | -- | -- | -- |
| 576.75 | 1.12 | 3.94 | -- | 0.998 | -- | -- | -- | -0.656 | 9.27 | -- | -- | -- | -- |
| 453.85 | 0.992 | 3.83 | -- | -- | -1.9 | -- | -- | -0.0629 | -- | 22.4 | 891 | -- | -- |
| 634.71 | 1.18 | 3.96 | -- | -- | -- | -- | -- | -0.651 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 389.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 14 | 390.30 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 46 | 392.45 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 78 | 394.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 85 | 394.69 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 101 | 395.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 118 | 396.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 190 | 400.62 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 204 | 401.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 324 | 403.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 961 | 411.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 984 | 412.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 1000 | 412.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 9 |