Os04g0615600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0615600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.78 | 0.684 | 4.78 | -0.536 | 0.558 | -1.98 | -1.5 | 1.8 | -0.415 | 16.5 | 10.12 | 717 | -- | -- |
| 213.8 | 0.681 | 4.82 | -0.845 | 0.375 | -1.87 | -1.5 | -- | -0.504 | 16 | 10.71 | 883 | -- | -- |
| 217.27 | 0.687 | 4.77 | -0.448 | 0.294 | -1.81 | -- | 2.02 | -0.4 | 15 | 9.088 | 993 | -- | -- |
| 220.13 | 0.691 | 4.83 | -0.863 | 0.412 | -1.89 | -- | -- | -0.51 | 16.1 | 11.36 | 832 | -- | -- |
| 221.82 | 0.694 | 4.77 | -0.41 | -- | -1.93 | -- | 2.07 | -0.385 | -- | 12.94 | 1033 | -- | -- |
| 264.32 | 0.762 | 4.88 | -1.33 | 0.532 | -- | -1.01 | -- | -0.802 | 13.8 | -- | -- | -- | -- |
| 267.74 | 0.766 | 4.88 | -1.36 | 0.534 | -- | -- | -- | -0.809 | 13 | -- | -- | -- | -- |
| 225.44 | 0.699 | 4.82 | -0.833 | -- | -1.9 | -- | -- | -0.498 | -- | 11.89 | 1019 | -- | -- |
| 237.61 | 0.718 | 4.8 | -- | 0.313 | -2.18 | -- | -- | -0.373 | 15.9 | 14.4 | 933 | -- | -- |
| 285.49 | 0.79 | 4.89 | -1.38 | -- | -- | -- | -- | -0.819 | -- | -- | -- | -- | -- |
| 316.74 | 0.833 | 4.85 | -- | 0.557 | -- | -- | -- | -0.657 | 13.1 | -- | -- | -- | -- |
| 241.52 | 0.724 | 4.79 | -- | -- | -2.24 | -- | -- | -0.358 | -- | 14.2 | 1046 | -- | -- |
| 335.99 | 0.856 | 4.86 | -- | -- | -- | -- | -- | -0.666 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 19 |
| 14 | 206.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 11 |
| 19 | 206.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 24 | 206.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 4 |
| 25 | 206.71 | temperature | 15 | 720 | > th | dose dependent | sin | 2 | NA |
| 30 | 206.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 72 | 207.96 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 110 | 208.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 12 |
| 119 | 209.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 19 |
| 183 | 210.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 219 | 210.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 287 | 211.78 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 389 | 212.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 443 | 213.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 462 | 213.56 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 472 | 213.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 520 | 214.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 635 | 215.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 713 | 215.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 814 | 215.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 1 |