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Os04g0612900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.2 (0.014) R2 : 0.0133
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0732 (0.0295) R2dN8 : 0.0172 R2N8 : 0.0133
σ : 0.264
deviance : 31.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.18 0.231 9.11 0.75 0.229 -0.526 0.00556 2.26 0.103 6.13 25.27 1225 -- --
25.58 0.236 9.17 0.218 0.241 -0.282 0.186 -- 0.0345 6.63 25.36 8408 -- --
24.15 0.229 9.12 0.733 0.223 -0.527 -- 2.26 0.0981 5.99 25.3 1183 -- --
25.43 0.235 9.16 0.22 0.227 -0.314 -- -- 0.052 6.61 24.54 9661 -- --
25.89 0.237 9.13 0.681 -- -0.617 -- 2.61 0.083 -- 25.58 934 -- --
28.91 0.252 9.19 0.0874 0.226 -- 0.171 -- -0.066 7.45 -- -- -- --
28.98 0.252 9.19 0.0907 0.228 -- -- -- -0.0667 7.17 -- -- -- --
26.66 0.24 9.18 0.198 -- -0.465 -- -- 0.00777 -- 18.4 562 -- --
26.57 0.24 9.17 -- 0.233 -0.242 -- -- 0.000761 6.84 25.1 8335 -- --
31.72 0.263 9.19 0.0949 -- -- -- -- -0.0627 -- -- -- -- --
29.19 0.253 9.19 -- 0.229 -- -- -- -0.0768 7.15 -- -- -- --
27.73 0.245 9.18 -- -- -0.392 -- -- -0.0157 -- 20.62 565 -- --
31.96 0.264 9.2 -- -- -- -- -- -0.0732 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.37 temperature 25.0 720 > th dose dependent rect. 17 6
5 23.42 radiation 20.0 14400 < th dose independent rect. 3 3
7 23.43 temperature 25.0 720 > th dose dependent rect. 17 15
9 23.47 temperature 25.0 720 < th dose independent rect. 10 14
21 23.59 humidity 90.0 14400 > th dose dependent rect. 2 4
25 23.62 temperature 25.0 720 > th dose dependent sin 12 NA
28 23.63 temperature 25.0 720 > th dose dependent rect. 22 1
29 23.64 temperature 25.0 720 < th dose independent rect. 15 9
32 23.64 humidity 90.0 14400 > th dose dependent rect. 4 2
41 23.70 radiation 10.0 14400 > th dose independent rect. 5 1
61 23.76 humidity 50.0 1440 < th dose independent rect. 16 1
65 23.77 temperature 25.0 720 > th dose independent rect. 15 9
66 23.78 humidity 90.0 14400 > th dose independent rect. 2 1
67 23.78 humidity 50.0 1440 > th dose independent rect. 16 1
69 23.78 temperature 25.0 720 > th dose independent rect. 9 15
70 23.78 humidity 50.0 1440 < th dose dependent rect. 16 1
74 23.81 humidity 90.0 14400 < th dose independent rect. 2 1
83 23.84 humidity 90.0 14400 > th dose dependent rect. 2 1
89 23.87 radiation 1.0 43200 < th dose independent rect. 9 1
90 23.88 radiation 1.0 43200 > th dose independent rect. 9 1
93 23.88 radiation 40.0 14400 > th dose dependent rect. 15 18
94 23.89 temperature 25.0 720 < th dose independent sin 18 NA
97 23.89 radiation 1.0 43200 < th dose dependent rect. 19 10
105 23.91 wind 7.0 43200 > th dose independent rect. 10 4
109 23.92 humidity 90.0 14400 < th dose independent rect. 24 1
111 23.92 radiation 1.0 43200 < th dose dependent rect. 23 6
117 23.93 wind 7.0 43200 < th dose independent rect. 10 4
131 23.96 precipitation 0.1 43200 > th dose independent rect. 9 1
132 23.96 humidity 90.0 14400 < th dose independent rect. 24 3
133 23.96 radiation 20.0 14400 < th dose independent rect. 1 5
136 23.96 precipitation 0.1 43200 > th dose dependent rect. 9 1
140 23.97 atmosphere 1005.0 43200 > th dose dependent rect. 3 1
147 23.98 atmosphere 1010.0 43200 < th dose independent rect. 6 1
158 23.99 atmosphere 1010.0 43200 < th dose independent rect. 9 1
159 23.99 precipitation 0.1 43200 < th dose independent rect. 8 2
160 23.99 atmosphere 1010.0 43200 < th dose independent rect. 6 4
162 23.99 radiation 40.0 14400 > th dose dependent rect. 8 1
163 23.99 precipitation 0.1 43200 < th dose dependent rect. 8 2
181 24.00 wind 7.0 43200 > th dose dependent rect. 10 6
236 24.04 wind 1.0 43200 < th dose dependent rect. 7 1
239 24.05 wind 7.0 43200 < th dose independent rect. 11 1
255 24.06 wind 1.0 43200 < th dose dependent rect. 23 3
274 24.07 atmosphere 1010.0 43200 > th dose independent rect. 8 1
275 24.07 radiation 1.0 43200 > th dose independent rect. 18 1
278 24.07 radiation 1.0 43200 > th dose independent rect. 9 3
280 24.07 radiation 1.0 43200 < th dose independent rect. 9 3
298 24.08 wind 5.0 43200 > th dose dependent rect. 11 2
307 24.09 wind 7.0 43200 > th dose independent rect. 11 1
336 24.11 temperature 25.0 720 > th dose independent sin 18 NA
340 24.11 radiation 30.0 14400 < th dose independent rect. 16 2
358 24.12 radiation 1.0 43200 < th dose independent rect. 8 5
360 24.12 humidity 60.0 43200 < th dose dependent rect. 10 1
369 24.13 radiation 1.0 43200 > th dose independent rect. 8 5
371 24.13 radiation 30.0 14400 < th dose independent rect. 16 9
372 24.13 radiation 20.0 14400 < th dose independent rect. 18 12
387 24.14 radiation 30.0 14400 < th dose independent rect. 16 11
397 24.15 wind 9.0 14400 > th dose independent rect. 16 1
405 24.15 humidity 60.0 43200 < th dose independent rect. 2 10
426 24.16 radiation 30.0 14400 < th dose independent rect. 16 7
430 24.16 temperature 30.0 1440 > th dose independent rect. 18 21
432 24.16 atmosphere 1005.0 43200 > th dose dependent rect. 8 1
443 24.17 atmosphere 1010.0 43200 < th dose independent rect. 22 1
449 24.17 radiation 30.0 14400 < th dose independent rect. 16 4
457 24.17 atmosphere 1005.0 43200 > th dose dependent sin 7 NA
462 24.17 temperature 30.0 720 < th dose dependent rect. 19 3
473 24.18 temperature 20.0 43200 > th dose independent rect. 6 1
491 24.18 radiation 1.0 43200 < th dose dependent rect. 9 3
500 24.19 temperature 20.0 43200 < th dose independent rect. 6 1
505 24.19 humidity 60.0 43200 < th dose independent rect. 6 6
516 24.19 temperature 20.0 43200 < th dose dependent rect. 2 1
524 24.19 radiation 1.0 43200 < th dose dependent rect. 8 5
552 24.20 radiation 1.0 43200 < th dose dependent rect. 6 4
557 24.20 humidity 90.0 43200 > th dose dependent rect. 2 10
568 24.21 radiation 10.0 43200 < th dose independent rect. 6 1
608 24.22 temperature 30.0 1440 > th dose independent rect. 9 6
609 24.22 radiation 1.0 43200 < th dose independent rect. 18 7
613 24.22 radiation 1.0 43200 < th dose independent rect. 18 9
636 24.23 radiation 1.0 43200 < th dose independent rect. 18 1
642 24.23 humidity 90.0 14400 > th dose independent rect. 23 4
648 24.23 humidity 60.0 43200 > th dose independent rect. 3 8
662 24.23 temperature 25.0 720 < th dose independent rect. 5 19
716 24.24 humidity 90.0 43200 > th dose dependent sin 4 NA
808 24.26 temperature 20.0 43200 < th dose independent rect. 1 1
816 24.26 humidity 60.0 43200 > th dose independent rect. 7 4
823 24.26 temperature 20.0 43200 < th dose independent rect. 1 7
832 24.26 atmosphere 1010.0 43200 < th dose independent rect. 22 12
838 24.26 radiation 1.0 43200 < th dose dependent rect. 9 1
865 24.26 radiation 1.0 43200 < th dose dependent rect. 18 21
868 24.27 humidity 60.0 43200 < th dose independent rect. 10 1
875 24.27 temperature 20.0 43200 < th dose independent rect. 2 5
890 24.27 radiation 1.0 43200 < th dose dependent rect. 4 1
900 24.27 radiation 1.0 43200 < th dose dependent rect. 18 7
902 24.27 temperature 10.0 720 > th dose dependent rect. 16 9
931 24.28 temperature 20.0 43200 > th dose independent rect. 2 1