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Os04g0611200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0237) R2 : 0.459
β1 : -0.703 (0.0868) R2dD : 0.0808 R2D : 0.0787
β2 : 1.05 (0.061) R2dC : 0.354 R2C : 0.346
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.175 (0.0506) R2dN8 : 0.0191 R2N8 : 0.0312
σ : 0.445
deviance : 90.5
__
_____
C
peak time of C : 4.58
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.76 0.406 10.6 -0.892 1.08 0.654 0.231 0.181 -0.00425 4.99 21.62 806 -- --
74.86 0.403 10.6 -0.932 1.08 0.65 0.25 -- -0.0156 4.97 21.7 798 -- --
74.88 0.403 10.6 -0.9 1.08 0.655 -- 0.153 -0.00744 5.02 21.6 798 -- --
74.96 0.403 10.6 -0.944 1.08 0.649 -- -- -0.0177 5.02 21.63 797 -- --
131.48 0.534 10.6 -0.791 -- 0.709 -- 0.398 0.0531 -- 21.8 1111 -- --
90.3 0.445 10.6 -0.701 1.05 -- 0.278 -- 0.177 4.53 -- -- -- --
90.5 0.445 10.6 -0.703 1.05 -- -- -- 0.175 4.58 -- -- -- --
130.83 0.533 10.6 -0.942 -- 0.72 -- -- -0.0237 -- 21.84 1140 -- --
95.46 0.455 10.6 -- 1.04 0.417 -- -- 0.128 4.9 22.24 882 -- --
149.62 0.572 10.6 -0.662 -- -- -- -- 0.203 -- -- -- -- --
103.53 0.476 10.6 -- 1.04 -- -- -- 0.253 4.6 -- -- -- --
150.59 0.572 10.6 -- -- 0.479 -- -- 0.124 -- 22.4 1128 -- --
161.2 0.593 10.6 -- -- -- -- -- 0.276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.70 temperature 10.0 270 > th dose dependent rect. 18 13
2 67.26 temperature 20.0 270 > th dose independent rect. 4 3
3 67.27 temperature 20.0 270 > th dose independent rect. 17 14
6 67.71 temperature 15.0 270 > th dose dependent rect. 4 3
8 68.13 temperature 20.0 270 > th dose dependent rect. 5 1
9 68.18 temperature 20.0 270 > th dose independent rect. 5 1
21 69.31 temperature 20.0 270 > th dose independent rect. 3 19
25 69.43 temperature 30.0 90 < th dose dependent rect. 23 6
39 70.37 radiation 10.0 270 < th dose independent rect. 17 14
53 70.99 radiation 10.0 270 < th dose independent rect. 4 3
66 71.40 temperature 20.0 90 > th dose independent rect. 5 18
68 71.61 radiation 20.0 90 < th dose independent rect. 5 6
69 71.61 radiation 20.0 90 < th dose independent rect. 5 18
77 71.91 wind 1.0 270 > th dose independent rect. 7 21
84 72.12 temperature 15.0 90 > th dose dependent rect. 20 13
86 72.19 radiation 40.0 90 < th dose dependent rect. 5 18
96 72.38 temperature 20.0 10 > th dose dependent rect. 5 5
104 72.62 radiation 30.0 90 < th dose dependent rect. 5 6
112 72.68 precipitation 0.1 270 < th dose independent rect. 7 10
113 72.68 humidity 50.0 270 > th dose independent rect. 17 14
114 72.68 precipitation 0.1 270 < th dose dependent rect. 7 10
115 72.68 radiation 40.0 270 < th dose dependent rect. 17 14
119 72.73 humidity 80.0 270 > th dose independent rect. 4 3
122 72.74 radiation 40.0 90 < th dose dependent rect. 5 4
125 72.79 temperature 30.0 10 < th dose dependent rect. 23 7
138 72.90 humidity 80.0 270 > th dose independent rect. 3 6
139 72.90 temperature 10.0 270 > th dose independent rect. 7 10
140 72.90 atmosphere 1015.0 270 < th dose independent rect. 7 10
141 72.90 temperature 10.0 270 > th dose independent rect. 17 14
144 72.92 wind 1.0 270 > th dose independent rect. 7 10
145 72.93 radiation 10.0 270 < th dose independent rect. 15 17
149 72.99 temperature 30.0 10 < th dose dependent sin 9 NA
152 73.02 wind 9.0 270 < th dose independent rect. 17 14
156 73.06 humidity 50.0 90 > th dose dependent rect. 5 4
158 73.08 temperature 10.0 90 > th dose dependent rect. 5 18
164 73.12 radiation 20.0 270 < th dose dependent rect. 3 6
165 73.14 temperature 20.0 720 > th dose independent rect. 19 4
166 73.14 precipitation 0.1 270 < th dose independent rect. 7 21
168 73.14 precipitation 0.1 270 < th dose dependent rect. 7 21
172 73.16 humidity 60.0 90 > th dose dependent rect. 5 6
178 73.24 radiation 20.0 90 < th dose independent rect. 5 10
185 73.30 atmosphere 995.0 270 > th dose independent rect. 17 14
191 73.33 precipitation 0.1 270 < th dose independent rect. 6 23
192 73.33 precipitation 0.1 270 < th dose dependent rect. 6 23
195 73.35 radiation 20.0 270 < th dose dependent rect. 3 11
197 73.36 radiation 10.0 270 < th dose independent rect. 3 10
206 73.42 atmosphere 1010.0 270 < th dose independent rect. 4 3
211 73.44 wind 9.0 270 < th dose independent rect. 7 10
213 73.44 temperature 10.0 720 > th dose dependent rect. 19 6
221 73.48 temperature 15.0 10 > th dose dependent sin 8 NA
228 73.52 temperature 20.0 720 > th dose independent rect. 19 6
236 73.57 wind 1.0 90 > th dose independent rect. 9 20
242 73.62 humidity 60.0 270 > th dose dependent rect. 3 6
264 73.77 radiation 40.0 90 < th dose independent rect. 5 18
282 73.85 atmosphere 1010.0 270 < th dose independent rect. 17 15
284 73.85 temperature 30.0 90 < th dose dependent rect. 19 10
287 73.88 radiation 10.0 270 < th dose dependent rect. 5 1
291 73.88 temperature 20.0 10 > th dose dependent rect. 20 14
305 73.94 radiation 30.0 90 < th dose dependent rect. 5 10
310 73.99 temperature 10.0 720 > th dose dependent rect. 19 4
316 74.01 humidity 70.0 90 > th dose dependent rect. 5 18
318 74.02 atmosphere 995.0 90 > th dose dependent rect. 9 20
320 74.04 temperature 20.0 10 > th dose dependent rect. 18 16
327 74.07 precipitation 0.1 90 < th dose independent rect. 9 20
330 74.07 precipitation 0.1 90 < th dose dependent rect. 9 20
334 74.10 wind 9.0 90 < th dose dependent rect. 5 4
345 74.14 wind 3.0 90 < th dose independent rect. 5 4
357 74.22 atmosphere 1010.0 270 < th dose independent rect. 3 5
363 74.24 atmosphere 1015.0 90 < th dose independent rect. 5 18
371 74.28 radiation 10.0 270 < th dose independent rect. 3 16
374 74.29 radiation 1.0 90 < th dose dependent sin 10 NA
389 74.37 temperature 20.0 10 > th dose independent rect. 20 14
393 74.40 wind 5.0 90 < th dose independent rect. 23 6
405 74.46 temperature 20.0 10 > th dose dependent rect. 3 7
412 74.49 wind 9.0 90 < th dose independent rect. 5 4
413 74.49 temperature 10.0 90 > th dose independent rect. 5 4
416 74.49 atmosphere 995.0 90 > th dose independent rect. 5 4
421 74.49 temperature 10.0 90 > th dose independent rect. 9 20
422 74.50 humidity 80.0 270 > th dose independent rect. 5 1
432 74.53 wind 1.0 90 > th dose independent rect. 23 6
440 74.55 temperature 30.0 270 < th dose independent rect. 4 3
448 74.55 temperature 10.0 270 > th dose independent rect. 7 21
450 74.56 precipitation 0.1 90 < th dose independent rect. 5 4
452 74.56 precipitation 0.1 90 < th dose dependent rect. 5 4
459 74.59 radiation 30.0 90 < th dose dependent rect. 5 8
477 74.65 wind 9.0 90 < th dose independent rect. 9 20
487 74.67 temperature 30.0 90 < th dose dependent rect. 17 12
495 74.70 humidity 70.0 270 > th dose dependent rect. 5 1
500 74.71 wind 9.0 1440 < th dose independent rect. 24 6
503 74.71 temperature 25.0 720 < th dose dependent rect. 15 13
516 74.75 temperature 25.0 720 < th dose dependent rect. 16 11
533 74.81 precipitation 0.1 90 < th dose independent rect. 23 6
536 74.81 precipitation 0.1 90 < th dose dependent rect. 23 6
564 74.87 humidity 70.0 90 > th dose dependent rect. 5 10
589 74.93 temperature 10.0 270 > th dose dependent rect. 3 19
590 74.94 wind 9.0 270 < th dose independent rect. 7 21
591 74.94 temperature 25.0 720 < th dose dependent sin 15 NA
598 74.97 humidity 80.0 270 > th dose independent rect. 3 11
603 74.98 temperature 20.0 720 > th dose independent rect. 11 14
617 75.01 humidity 70.0 30 > th dose independent rect. 5 18
621 75.01 radiation 1.0 90 < th dose dependent rect. 23 6
630 75.02 humidity 70.0 270 > th dose dependent rect. 3 11
631 75.02 temperature 10.0 270 > th dose dependent rect. 2 21
642 75.04 radiation 40.0 270 < th dose independent rect. 12 10
647 75.06 temperature 10.0 90 > th dose independent rect. 23 6
648 75.06 temperature 30.0 90 < th dose independent rect. 23 6
649 75.06 humidity 50.0 90 > th dose independent rect. 23 6
652 75.06 atmosphere 995.0 90 > th dose independent rect. 23 6
653 75.06 radiation 20.0 90 < th dose independent rect. 23 6
656 75.06 temperature 10.0 90 > th dose independent rect. 5 18
663 75.07 radiation 20.0 90 < th dose dependent rect. 23 6
671 75.09 radiation 1.0 90 < th dose independent rect. 23 6
677 75.09 radiation 40.0 270 < th dose dependent rect. 11 21
680 75.11 temperature 20.0 720 > th dose independent sin 15 NA
701 75.13 radiation 1.0 90 < th dose dependent rect. 22 9
702 75.13 humidity 50.0 10 > th dose dependent rect. 6 17
707 75.15 humidity 80.0 90 > th dose independent rect. 5 10
708 75.15 atmosphere 995.0 270 > th dose independent rect. 7 10
718 75.16 atmosphere 995.0 10 > th dose dependent rect. 10 19
726 75.18 radiation 10.0 10 < th dose dependent rect. 23 7
729 75.19 atmosphere 1010.0 270 < th dose independent rect. 3 19
739 75.23 atmosphere 1015.0 90 < th dose dependent rect. 5 18
775 75.28 radiation 20.0 270 < th dose dependent rect. 3 16
816 75.36 wind 9.0 90 < th dose independent rect. 5 18
832 75.39 radiation 30.0 10 < th dose dependent rect. 6 3
881 75.48 wind 9.0 270 < th dose dependent rect. 5 1
915 75.53 radiation 40.0 270 < th dose dependent rect. 13 19
919 75.54 radiation 20.0 270 < th dose dependent rect. 3 18
920 75.55 wind 7.0 270 < th dose independent rect. 5 1
922 75.55 temperature 10.0 270 > th dose independent rect. 5 1
924 75.55 temperature 30.0 270 < th dose independent rect. 5 1
925 75.55 humidity 50.0 270 > th dose independent rect. 5 1
928 75.55 atmosphere 995.0 270 > th dose independent rect. 5 1
935 75.55 temperature 10.0 270 > th dose independent rect. 6 23
987 75.64 precipitation 0.1 270 < th dose independent rect. 5 1
991 75.64 precipitation 0.1 270 < th dose dependent rect. 5 1
1000 75.65 radiation 1.0 270 > th dose independent rect. 7 10