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Os04g0595800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Secretory carrier membrane protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0228) R2 : 0.717
β1 : -1.34 (0.0856) R2dD : 0.171 R2D : -0.00558
β2 : 1.59 (0.054) R2dC : 0.553 R2C : 0.412
β3 : 1.85 (0.111) R2dE : 0.203 R2E : -0.0776
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.588 (0.0504) R2dN8 : 0.125 R2N8 : -0.0287
σ : 0.421
deviance : 81.64
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_____
C
peak time of C : 0.219
E
wheather : temperature
threshold : 10.68
memory length : 319
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.7 0.401 11.2 -1.25 1.65 1.9 1.47 0.331 -0.573 0.253 10.47 275 -- --
72.77 0.397 11.2 -1.3 1.65 1.9 1.44 -- -0.586 0.236 9.359 272 -- --
81.7 0.421 11.2 -1.33 1.65 1.87 -- -0.113 -0.585 0.174 14.33 274 -- --
81.64 0.421 11.2 -1.34 1.59 1.85 -- -- -0.588 0.219 10.68 319 -- --
164.37 0.597 11.2 -1.34 -- 2.34 -- 1.19 -0.624 -- 15.73 831 -- --
110.46 0.493 11.2 -0.89 1.53 -- 1.35 -- -0.318 23 -- -- -- --
118.13 0.509 11.2 -0.945 1.53 -- -- -- -0.322 22.9 -- -- -- --
146.64 0.564 11.2 -1.43 -- 2.01 -- -- -0.549 -- 24.1 902 -- --
116.54 0.503 11.2 -- 1.19 1.04 -- -- -0.353 23.3 24.61 912 -- --
262.84 0.758 11.1 -0.912 -- -- -- -- -0.311 -- -- -- -- --
141.65 0.557 11.2 -- 1.52 -- -- -- -0.217 22.9 -- -- -- --
197.32 0.654 11.1 -- -- 1.7 -- -- -0.341 -- 24.4 884 -- --
284.76 0.788 11.1 -- -- -- -- -- -0.21 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.08 temperature 15 270 > th dose dependent rect. 13 15
2 63.13 temperature 15 90 > th dose dependent rect. 15 14
3 64.02 temperature 15 270 > th dose dependent rect. 11 17
16 65.29 temperature 15 10 > th dose dependent rect. 15 15
31 66.39 temperature 15 270 > th dose dependent rect. 8 22
60 68.00 temperature 20 90 > th dose dependent sin 14 NA
107 69.10 temperature 10 270 > th dose dependent rect. 22 23
116 69.24 temperature 30 720 < th dose dependent rect. 9 15
119 69.28 temperature 30 30 < th dose dependent rect. 6 20
121 69.29 temperature 30 270 < th dose dependent rect. 15 9
141 69.54 temperature 20 720 > th dose dependent sin 18 NA
151 69.70 temperature 30 90 < th dose dependent rect. 5 22
196 70.21 temperature 25 1440 > th dose dependent rect. 9 3
204 70.26 temperature 25 1440 > th dose dependent rect. 11 1
240 70.55 radiation 40 4320 < th dose dependent rect. 18 7
247 70.64 temperature 25 720 > th dose independent rect. 7 18
249 70.66 temperature 25 1440 > th dose dependent rect. 22 14
260 70.78 temperature 30 90 < th dose dependent sin 15 NA
264 70.81 temperature 25 4320 < th dose independent rect. 17 2
272 70.89 radiation 40 4320 < th dose dependent rect. 18 9
293 70.99 temperature 25 720 > th dose dependent rect. 15 19
319 71.17 temperature 25 4320 > th dose independent rect. 17 2
331 71.25 temperature 30 720 < th dose dependent sin 19 NA
386 71.51 temperature 25 1440 > th dose dependent sin 6 NA
403 71.58 temperature 15 1440 > th dose dependent rect. 9 3
404 71.58 temperature 25 720 > th dose dependent rect. 15 21
443 71.73 temperature 25 720 < th dose independent rect. 6 18
463 71.82 temperature 15 1440 > th dose dependent rect. 11 1
493 71.91 temperature 25 720 < th dose independent rect. 9 15
502 71.93 temperature 30 10 < th dose dependent rect. 17 9
530 72.03 temperature 20 720 > th dose dependent rect. 13 10
551 72.09 temperature 10 720 > th dose dependent rect. 15 8
566 72.13 radiation 1 14400 > th dose dependent rect. 17 13
570 72.15 temperature 25 720 > th dose dependent sin 11 NA
598 72.25 radiation 1 14400 > th dose dependent rect. 17 2
622 72.30 humidity 60 30 > th dose dependent rect. 6 20
648 72.38 radiation 1 4320 > th dose dependent rect. 16 16
667 72.43 radiation 40 4320 < th dose dependent rect. 16 16
685 72.47 radiation 20 14400 < th dose dependent rect. 17 12
697 72.49 temperature 20 720 > th dose dependent rect. 15 6
732 72.55 radiation 20 14400 < th dose dependent rect. 17 4
738 72.56 radiation 20 14400 < th dose dependent rect. 17 2
773 72.60 temperature 10 720 > th dose dependent rect. 15 10
778 72.61 temperature 30 1440 < th dose dependent rect. 7 3
782 72.62 radiation 10 14400 < th dose independent rect. 16 14
813 72.69 temperature 10 720 > th dose dependent rect. 15 6
817 72.70 temperature 10 270 > th dose dependent no NA NA
821 72.71 radiation 10 14400 < th dose independent rect. 16 9
834 72.73 radiation 10 14400 < th dose independent rect. 16 7
844 72.74 temperature 25 720 > th dose independent sin 19 NA
845 72.74 radiation 10 14400 < th dose independent rect. 16 3
850 72.74 temperature 30 1440 < th dose dependent rect. 6 5
855 72.75 radiation 1 14400 > th dose independent rect. 17 13
894 72.83 radiation 1 14400 > th dose independent rect. 17 1
895 72.83 temperature 25 720 < th dose independent rect. 13 11
900 72.84 radiation 1 14400 > th dose independent rect. 5 1
901 72.84 radiation 30 14400 < th dose independent rect. 15 17
906 72.84 temperature 30 10 < th dose dependent rect. 14 12
912 72.85 temperature 25 720 < th dose independent sin 18 NA
943 72.90 radiation 1 14400 < th dose independent rect. 5 1
951 72.91 temperature 30 270 < th dose dependent rect. 17 16
988 72.99 temperature 10 4320 > th dose dependent rect. 16 1