Os04g0593500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Bet v I allergen family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0593500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Bet v I allergen family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.01 | 0.385 | 2.83 | -0.0441 | 0.0149 | 0.174 | -0.2 | -1.28 | 0.0879 | 7.26 | 0.9226 | 9 | -- | -- |
| 68.11 | 0.384 | 2.82 | -0.0229 | 0.0246 | 0.11 | -0.255 | -- | 0.0994 | 7.22 | 1.3 | 26 | -- | -- |
| 67.05 | 0.381 | 2.83 | -0.0457 | 0.013 | 0.207 | -- | -1.36 | 0.0869 | 7 | 0.9 | 8 | -- | -- |
| 68.27 | 0.385 | 2.82 | -0.0317 | 0.00355 | 0.128 | -- | -- | 0.0952 | 7.04 | 1.3 | 26 | -- | -- |
| 67.06 | 0.381 | 2.83 | -0.0456 | -- | 0.211 | -- | -1.37 | 0.0872 | -- | 0.8999 | 8 | -- | -- |
| 68.53 | 0.388 | 2.82 | -0.00774 | 0.05 | -- | -0.294 | -- | 0.0915 | 5.62 | -- | -- | -- | -- |
| 68.75 | 0.388 | 2.82 | -0.00926 | 0.0484 | -- | -- | -- | 0.0927 | 5.25 | -- | -- | -- | -- |
| 68.28 | 0.385 | 2.82 | -0.0322 | -- | 0.13 | -- | -- | 0.0967 | -- | 1.3 | 26 | -- | -- |
| 68.3 | 0.385 | 2.82 | -- | 0.0108 | 0.124 | -- | -- | 0.1 | 8.71 | 1.3 | 26 | -- | -- |
| 68.87 | 0.388 | 2.82 | -0.00758 | -- | -- | -- | -- | 0.0939 | -- | -- | -- | -- | -- |
| 68.75 | 0.388 | 2.82 | -- | 0.0482 | -- | -- | -- | 0.0937 | 5.26 | -- | -- | -- | -- |
| 68.3 | 0.385 | 2.82 | -- | -- | 0.125 | -- | -- | 0.0999 | -- | 1.283 | 26 | -- | -- |
| 68.87 | 0.387 | 2.82 | -- | -- | -- | -- | -- | 0.0948 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.71 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 2 | 59.84 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 4 | 59.87 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 6 | 59.92 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 59.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 13 | 59.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 17 | 59.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 23 | 59.95 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 24 | 59.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 44 | 59.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 47 | 59.98 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 49 | 60.00 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 55 | 60.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 57 | 60.15 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 59 | 60.17 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 60 | 60.18 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 63 | 60.23 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 89 | 60.23 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 118 | 60.29 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 120 | 60.31 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 122 | 60.32 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 137 | 60.35 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 138 | 60.36 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 141 | 60.37 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 158 | 60.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 160 | 60.39 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 161 | 60.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 165 | 60.39 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 167 | 60.39 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 172 | 60.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 173 | 60.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 174 | 60.39 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 179 | 60.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 196 | 60.45 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 197 | 60.48 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 199 | 60.50 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 205 | 60.54 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 252 | 60.74 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 253 | 60.74 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 261 | 60.91 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 265 | 60.93 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 17 |
| 280 | 60.96 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 287 | 60.97 | humidity | 60.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 351 | 60.97 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 447 | 60.99 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 454 | 61.00 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 492 | 61.07 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 534 | 61.13 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 555 | 61.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 9 |
| 580 | 61.19 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 602 | 61.21 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 690 | 61.40 | radiation | 20.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 919 | 62.11 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 921 | 62.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 926 | 62.12 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 951 | 62.22 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 956 | 62.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 988 | 62.32 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 1 |