Os04g0590100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0590100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.42 | 0.337 | 2.88 | -0.336 | 0.118 | 0.691 | -0.165 | -5.34 | 0.0357 | 5.2 | 30.8 | 20 | -- | -- |
| 54.03 | 0.345 | 2.85 | -0.0087 | 0.126 | 0.168 | -0.0951 | -- | 0.0339 | 5.64 | 30.89 | 22 | -- | -- |
| 51.47 | 0.337 | 2.88 | -0.324 | 0.118 | 0.69 | -- | -5.31 | 0.0364 | 5.75 | 30.8 | 20 | -- | -- |
| 54.03 | 0.342 | 2.85 | -0.0112 | 0.13 | 0.172 | -- | -- | 0.0348 | 5.84 | 30.8 | 20 | -- | -- |
| 52.15 | 0.338 | 2.89 | -0.324 | -- | 0.662 | -- | -5.41 | 0.0365 | -- | 30.8 | 20 | -- | -- |
| 54.72 | 0.347 | 2.85 | 0.00654 | 0.1 | -- | -0.131 | -- | 0.0224 | 5.94 | -- | -- | -- | -- |
| 54.74 | 0.346 | 2.85 | 0.00598 | 0.101 | -- | -- | -- | 0.0231 | 6.6 | -- | -- | -- | -- |
| 54.83 | 0.346 | 2.85 | -0.00207 | -- | 0.13 | -- | -- | 0.0345 | -- | 30.8 | 20 | -- | -- |
| 54.03 | 0.342 | 2.85 | -- | 0.128 | 0.17 | -- | -- | 0.036 | 5.89 | 30.74 | 20 | -- | -- |
| 55.28 | 0.347 | 2.85 | 0.00842 | -- | -- | -- | -- | 0.0251 | -- | -- | -- | -- | -- |
| 54.74 | 0.346 | 2.85 | -- | 0.101 | -- | -- | -- | 0.0224 | 6.59 | -- | -- | -- | -- |
| 54.83 | 0.346 | 2.85 | -- | -- | 0.13 | -- | -- | 0.0347 | -- | 30.8 | 20 | -- | -- |
| 55.28 | 0.347 | 2.85 | -- | -- | -- | -- | -- | 0.0242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.35 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 90 | 50.25 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 91 | 50.33 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 116 | 50.69 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 283 | 51.57 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 309 | 51.74 | wind | 1.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 346 | 51.82 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 402 | 52.01 | temperature | 30.0 | 90 | < th | dose independent | sin | 8 | NA |
| 439 | 52.13 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 445 | 52.18 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 446 | 52.18 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 19 |
| 457 | 52.20 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 458 | 52.20 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 465 | 52.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 467 | 52.21 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 468 | 52.21 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 472 | 52.21 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 474 | 52.21 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 479 | 52.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 480 | 52.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 481 | 52.21 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 486 | 52.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 505 | 52.22 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 5 |
| 506 | 52.22 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 513 | 52.24 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 515 | 52.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 518 | 52.25 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 520 | 52.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 527 | 52.27 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 665 | 52.41 | temperature | 30.0 | 10 | > th | dose dependent | no | NA | NA |
| 772 | 52.43 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 798 | 52.48 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 845 | 52.57 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 23 |
| 877 | 52.62 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 880 | 52.63 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 886 | 52.64 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 891 | 52.65 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 909 | 52.66 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 19 |
| 934 | 52.69 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 983 | 52.76 | wind | 1.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 1000 | 52.80 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 23 |