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Os04g0583000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0381) R2 : 0.875
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.45 (0.151) R2dC : 0.348 R2C : 0.701
β3 : -2.76 (0.177) R2dE : 0.159 R2E : 0.52
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.512 (0.0799) R2dN8 : 0.0154 R2N8 : 0.00779
σ : 0.713
deviance : 234.18
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_____
C
peak time of C : 7.9
E
wheather : radiation
threshold : 11.73
memory length : 6
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 14.4
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
225.81 0.706 11.5 0.434 3.58 -2.76 1.79 1.73 -0.485 7.96 11.4 9 14.8 --
228.18 0.704 11.5 0.527 3.35 -2.81 1.06 -- -0.447 7.84 11.34 6 14.3 --
230.52 0.707 11.5 0.471 3.39 -2.76 -- 0.227 -0.487 7.88 12.37 8 14.3 --
228.79 0.704 11.5 0.455 3.49 -2.73 -- -- -0.484 7.91 11.25 6 14.5 --
291.78 0.796 11.7 0.193 -- -5.41 -- -0.0507 -0.7 -- 51.25 26 11.5 --
347.22 0.874 11.4 0.449 5.27 -- 0.824 -- -0.503 7.78 -- -- -- --
349.16 0.875 11.4 0.47 5.27 -- -- -- -0.504 7.77 -- -- -- --
277.86 0.776 11.6 0.434 -- -5.44 -- -- -0.619 -- 72.84 25 11.2 --
234.18 0.713 11.5 -- 3.45 -2.76 -- -- -0.512 7.9 11.73 6 14.4 --
1849.94 2.01 11.6 0.535 -- -- -- -- -0.43 -- -- -- -- --
354.98 0.881 11.5 -- 5.27 -- -- -- -0.556 7.77 -- -- -- --
282.83 0.783 11.6 -- -- -5.45 -- -- -0.668 -- 72.69 25 11.2 --
1857.48 2.01 11.6 -- -- -- -- -- -0.489 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 227.28 radiation 10.0 10 < th dose dependent sin 21 NA
2 228.19 temperature 20.0 30 > th dose independent rect. 16 18
3 228.42 temperature 20.0 270 > th dose independent rect. 14 7
9 232.14 humidity 50.0 270 > th dose independent rect. 14 5
12 233.18 radiation 1.0 270 > th dose independent rect. 8 7
16 235.46 atmosphere 1015.0 270 < th dose independent rect. 15 17
19 237.06 temperature 20.0 270 > th dose independent rect. 15 4
29 238.83 temperature 10.0 270 > th dose dependent rect. 15 17
30 239.10 humidity 50.0 270 > th dose independent rect. 14 18
33 239.66 radiation 40.0 270 < th dose independent rect. 14 18
35 240.20 precipitation 0.1 270 < th dose independent rect. 8 7
36 240.20 precipitation 0.1 270 < th dose dependent rect. 8 7
43 240.97 temperature 10.0 270 > th dose independent rect. 8 7
44 240.97 atmosphere 1015.0 270 < th dose independent rect. 8 7
45 240.97 temperature 10.0 270 > th dose independent rect. 15 17
46 241.09 radiation 30.0 270 < th dose independent rect. 14 5
53 241.66 atmosphere 1010.0 270 < th dose independent rect. 14 6
59 242.28 radiation 1.0 10 > th dose independent rect. 10 6
63 242.49 wind 9.0 270 < th dose independent rect. 15 17
64 242.69 wind 9.0 270 < th dose independent rect. 8 7
65 242.71 temperature 30.0 270 < th dose dependent rect. 19 8
71 243.10 precipitation 0.1 270 < th dose independent rect. 19 20
72 243.10 precipitation 0.1 270 < th dose dependent rect. 19 20
75 243.23 temperature 10.0 270 > th dose independent rect. 20 18
76 243.23 atmosphere 995.0 270 > th dose independent rect. 20 18
77 243.34 precipitation 0.1 270 < th dose independent rect. 20 18
78 243.34 precipitation 0.1 270 < th dose dependent rect. 20 18
81 243.66 precipitation 0.1 270 < th dose independent rect. 19 9
82 243.66 precipitation 0.1 270 < th dose dependent rect. 19 9
87 243.88 atmosphere 995.0 270 > th dose independent rect. 8 7
88 243.94 wind 9.0 270 < th dose independent rect. 19 8
92 244.08 temperature 10.0 270 > th dose independent rect. 19 8
93 244.08 temperature 30.0 270 < th dose independent rect. 19 8
94 244.08 humidity 50.0 270 > th dose independent rect. 19 8
95 244.08 atmosphere 995.0 270 > th dose independent rect. 19 8
96 244.08 radiation 1.0 270 < th dose independent rect. 19 8
101 244.08 temperature 10.0 270 > th dose independent rect. 3 16
102 244.08 atmosphere 1015.0 270 < th dose independent rect. 3 16
103 244.08 atmosphere 1015.0 10 < th dose independent rect. 16 18
104 244.08 radiation 10.0 270 < th dose dependent rect. 19 8
108 244.08 radiation 10.0 10 < th dose dependent rect. 7 14
110 244.11 humidity 50.0 270 > th dose independent rect. 3 16
113 244.27 atmosphere 1015.0 270 < th dose independent rect. 13 8
115 244.35 wind 9.0 270 < th dose independent rect. 14 6
139 244.52 wind 9.0 270 < th dose independent rect. 20 18
143 244.74 radiation 40.0 90 < th dose dependent rect. 15 6
144 244.75 wind 9.0 270 < th dose independent rect. 3 16
148 244.81 atmosphere 995.0 270 > th dose independent rect. 14 6
149 244.82 precipitation 0.1 270 < th dose independent rect. 9 16
150 244.82 precipitation 0.1 270 < th dose dependent rect. 9 16
151 244.88 wind 1.0 270 > th dose independent rect. 14 6
155 245.03 atmosphere 995.0 270 > th dose independent rect. 15 17
162 245.22 radiation 40.0 90 < th dose dependent rect. 13 8
170 245.62 radiation 20.0 10 < th dose dependent rect. 12 10
171 245.63 temperature 10.0 270 > th dose independent rect. 15 4
173 245.63 atmosphere 1010.0 270 < th dose independent rect. 15 4
175 245.63 temperature 10.0 270 > th dose independent rect. 19 20
180 245.79 radiation 1.0 30 > th dose independent sin 22 NA
219 246.95 radiation 40.0 90 < th dose dependent rect. 15 19
222 247.01 wind 9.0 270 < th dose independent rect. 15 4
223 247.09 temperature 30.0 90 < th dose dependent rect. 21 8
224 247.14 radiation 1.0 30 < th dose independent sin 22 NA
227 247.24 wind 9.0 270 < th dose independent rect. 19 20
238 247.61 wind 1.0 270 > th dose independent rect. 15 4
255 248.00 atmosphere 995.0 270 > th dose independent rect. 15 4
258 248.10 humidity 50.0 10 > th dose independent rect. 16 18
282 248.59 atmosphere 995.0 270 > th dose independent rect. 3 16
291 248.93 wind 1.0 270 > th dose independent rect. 8 7
294 249.03 temperature 10.0 10 > th dose dependent rect. 16 18
333 250.08 radiation 1.0 10 > th dose independent rect. 10 8
345 250.42 humidity 60.0 270 > th dose independent rect. 1 8
348 250.52 radiation 10.0 10 > th dose independent sin 19 NA
351 250.57 temperature 10.0 270 > th dose independent rect. 1 8
354 250.57 atmosphere 995.0 270 > th dose independent rect. 1 8
355 250.57 atmosphere 1015.0 270 < th dose independent rect. 1 8
356 250.57 temperature 10.0 270 > th dose independent rect. 9 16
360 250.62 wind 9.0 270 < th dose independent rect. 1 8
374 250.94 temperature 30.0 10 < th dose dependent rect. 21 8
396 251.20 atmosphere 995.0 10 > th dose independent rect. 16 18
415 251.41 wind 1.0 270 > th dose independent rect. 19 8
422 251.51 precipitation 0.1 270 < th dose independent rect. 15 4
423 251.51 precipitation 0.1 270 < th dose dependent rect. 15 4
427 251.66 wind 9.0 270 < th dose independent rect. 9 16
433 251.79 humidity 90.0 270 < th dose independent rect. 14 5
435 251.80 wind 1.0 270 > th dose dependent rect. 15 4
445 251.95 precipitation 0.1 270 < th dose independent rect. 14 6
446 251.95 precipitation 0.1 270 < th dose dependent rect. 14 6
497 252.68 radiation 40.0 270 < th dose independent rect. 1 8
504 252.89 humidity 50.0 270 > th dose independent rect. 20 17
511 253.03 temperature 30.0 270 < th dose independent rect. 1 8
513 253.07 precipitation 0.1 270 < th dose independent rect. 15 17
514 253.07 precipitation 0.1 270 < th dose dependent rect. 15 17
515 253.08 temperature 10.0 10 > th dose independent rect. 10 6
517 253.08 atmosphere 1015.0 10 < th dose independent rect. 10 6
518 253.08 precipitation 0.1 10 < th dose independent rect. 10 6
520 253.08 precipitation 0.1 10 < th dose dependent rect. 10 6
524 253.12 precipitation 0.1 270 < th dose independent rect. 1 8
525 253.12 precipitation 0.1 270 < th dose dependent rect. 1 8
537 253.37 precipitation 0.1 270 < th dose independent rect. 3 16
538 253.37 precipitation 0.1 270 < th dose dependent rect. 3 16
585 254.34 wind 9.0 10 < th dose independent rect. 10 6
606 254.50 radiation 10.0 10 < th dose independent rect. 13 9
622 254.71 humidity 50.0 10 > th dose dependent rect. 16 18
638 254.93 wind 1.0 270 > th dose independent rect. 20 18
669 255.15 wind 9.0 10 < th dose independent rect. 16 18
699 255.62 radiation 1.0 90 < th dose independent rect. 7 12
750 256.16 temperature 10.0 10 > th dose dependent rect. 10 6
774 256.41 temperature 10.0 1440 > th dose independent rect. 11 6
778 256.41 temperature 10.0 1440 > th dose independent rect. 17 18
824 256.83 temperature 10.0 270 > th dose dependent rect. 14 7
959 257.87 atmosphere 995.0 10 > th dose independent rect. 10 6
968 257.95 radiation 1.0 90 < th dose independent rect. 11 8
981 258.04 wind 1.0 10 > th dose independent rect. 16 7