Os04g0578400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-ring hydroxylase (Fragment).
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Os04g0578400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-ring hydroxylase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.74 | 0.835 | 11 | -1.02 | 4.53 | -3.52 | 1.73 | 1.47 | -1.21 | 7.25 | 11.55 | 9 | 15.2 | -- |
| 317.77 | 0.83 | 11 | -1.02 | 4.62 | -3.46 | 0.872 | -- | -1.21 | 7.26 | 11.56 | 8 | 15.3 | -- |
| 320.73 | 0.834 | 11 | -0.96 | 4.59 | -3.45 | -- | 0.298 | -1.12 | 7.25 | 11.68 | 8 | 15.2 | -- |
| 319.72 | 0.833 | 11 | -1 | 4.59 | -3.48 | -- | -- | -1.22 | 7.26 | 11.6 | 8 | 15.2 | -- |
| 449.54 | 0.993 | 11.1 | -1.17 | -- | -6.62 | -- | -0.659 | -1.35 | -- | 45.05 | 38 | 12.1 | -- |
| 519.53 | 1.07 | 10.9 | -1.02 | 6.49 | -- | 0.988 | -- | -1.24 | 7.27 | -- | -- | -- | -- |
| 522.15 | 1.07 | 10.9 | -1 | 6.5 | -- | -- | -- | -1.24 | 7.26 | -- | -- | -- | -- |
| 390.4 | 0.92 | 11.1 | -1.04 | -- | -6.86 | -- | -- | -1.38 | -- | 75.22 | 25 | 11.8 | -- |
| 345.74 | 0.866 | 11 | -- | 4.73 | -3.47 | -- | -- | -1.14 | 7.27 | 10.75 | 8 | 15.5 | -- |
| 2759.99 | 2.45 | 11.1 | -0.886 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 548.5 | 1.1 | 10.9 | -- | 6.49 | -- | -- | -- | -1.13 | 7.27 | -- | -- | -- | -- |
| 419.19 | 0.954 | 11.1 | -- | -- | -6.84 | -- | -- | -1.27 | -- | 75.52 | 25 | 11.8 | -- |
| 2780.67 | 2.46 | 11 | -- | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.04 | radiation | 10.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 8 | 337.89 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 23 | 351.73 | radiation | 10.0 | 10 | > th | dose independent | sin | 20 | NA |
| 35 | 354.84 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 60 | 361.66 | radiation | 10.0 | 10 | < th | dose independent | sin | 20 | NA |
| 66 | 362.96 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 67 | 363.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 73 | 365.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 91 | 367.36 | radiation | 10.0 | 10 | > th | dose independent | rect. | 10 | 8 |
| 105 | 367.67 | radiation | 10.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 114 | 368.69 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 116 | 368.88 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 149 | 372.34 | temperature | 20.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 171 | 373.51 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 180 | 373.88 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 204 | 375.17 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 10 |
| 265 | 378.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 276 | 378.81 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 288 | 379.40 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 292 | 379.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 320 | 381.11 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 9 |
| 340 | 381.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 359 | 382.56 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 425 | 384.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 19 |
| 428 | 384.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 437 | 384.55 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 439 | 384.59 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 466 | 385.63 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 494 | 386.58 | humidity | 80.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 500 | 386.72 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 507 | 386.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 509 | 386.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 514 | 387.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 524 | 387.42 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 531 | 387.64 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 556 | 388.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 6 |
| 557 | 388.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 562 | 388.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 572 | 388.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 573 | 389.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 574 | 389.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 575 | 389.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 576 | 389.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 577 | 389.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 582 | 389.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 583 | 389.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 584 | 389.00 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 587 | 389.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 598 | 389.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 599 | 389.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 600 | 389.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 607 | 389.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 608 | 389.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 616 | 389.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 638 | 389.85 | radiation | 1.0 | 10 | > th | dose dependent | sin | 18 | NA |
| 660 | 390.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 661 | 390.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 662 | 390.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 663 | 390.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 674 | 390.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 676 | 390.22 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 678 | 390.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 679 | 390.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 683 | 390.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 694 | 390.75 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 21 |
| 701 | 390.87 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 742 | 391.42 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 743 | 391.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 744 | 391.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 745 | 391.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 754 | 391.66 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 758 | 391.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 766 | 391.82 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 774 | 392.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 775 | 392.06 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 785 | 392.21 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 791 | 392.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 5 |
| 792 | 392.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 807 | 392.56 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 817 | 392.78 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 4 |
| 824 | 392.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 827 | 392.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 829 | 392.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 830 | 392.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 855 | 393.30 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 859 | 393.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 863 | 393.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 910 | 394.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 980 | 395.39 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 4 |