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Os04g0578200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0282) R2 : 0.866
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.88 (0.0718) R2dE : 0.865 R2E : 0.865
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0569 (0.0594) R2dN8 : 0.000342 R2N8 : 3.28e-05
σ : 0.53
deviance : 129.7
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 34.44
memory length : 854
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.77
open length of G : 16.4

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.87 0.477 13.7 0.208 4.84 -2.1 1.46 0.96 0.0805 7.88 52 314 1.62 15.3
105.27 0.478 13.6 0.17 4.93 -2.27 2.24 -- 0.0873 7.99 51.78 323 1.51 15.4
106.08 0.48 13.7 0.279 4.82 -2.08 -- 1.66 0.0554 7.87 50.21 314 1.49 15.3
119.01 0.508 13.7 0.271 4.74 -2.12 -- -- 0.0607 7.93 49.52 315 1.65 15.3
147.48 0.566 13.8 0.991 -- -3.77 -- 0.847 0.0726 -- 37 918 1.68 17.3
151.57 0.577 13.7 0.328 3.93 -- 1.02 -- -0.0656 6.18 -- -- -- --
154.06 0.581 13.7 0.338 3.94 -- -- -- -0.0697 6.14 -- -- -- --
130.6 0.532 13.8 0.438 -- -3.74 -- -- 0.0347 -- 36.72 883 2.18 17.2
120.67 0.512 13.7 -- 4.75 -2.19 -- -- 0.0411 7.97 50.22 334 1.6 15.3
959.05 1.45 13.8 0.449 -- -- -- -- 0.0178 -- -- -- -- --
157.07 0.586 13.7 -- 3.95 -- -- -- -0.107 6.14 -- -- -- --
129.7 0.53 13.8 -- -- -3.88 -- -- -0.0569 -- 34.44 854 2.77 16.4
964.36 1.45 13.8 -- -- -- -- -- -0.0319 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 105.76 humidity 50.0 270 > th dose independent rect. 2 15
2 105.98 wind 9.0 270 < th dose independent rect. 3 14
3 106.26 humidity 50.0 270 > th dose independent rect. 13 18
7 107.08 wind 1.0 270 > th dose independent rect. 17 9
8 107.23 humidity 50.0 270 > th dose independent rect. 12 7
9 107.51 temperature 10.0 270 > th dose independent rect. 17 10
10 107.51 radiation 20.0 270 < th dose independent rect. 17 10
13 107.51 temperature 10.0 270 > th dose independent rect. 3 14
14 107.51 atmosphere 1015.0 270 < th dose independent rect. 3 14
15 107.57 precipitation 0.1 270 < th dose independent rect. 17 10
16 107.57 precipitation 0.1 270 < th dose dependent rect. 17 10
21 107.78 wind 9.0 270 < th dose independent rect. 17 10
31 108.08 radiation 40.0 270 < th dose dependent rect. 17 10
34 108.23 wind 9.0 270 < th dose independent rect. 11 8
37 108.40 atmosphere 995.0 270 > th dose independent rect. 17 10
44 108.72 atmosphere 995.0 270 > th dose independent rect. 2 15
47 108.87 temperature 30.0 270 < th dose independent rect. 19 16
51 108.99 wind 1.0 270 > th dose independent rect. 11 8
53 109.31 radiation 1.0 270 > th dose independent rect. 7 7
56 109.34 humidity 50.0 270 > th dose independent rect. 18 9
65 109.41 temperature 20.0 270 > th dose independent rect. 12 7
66 109.41 precipitation 0.1 270 < th dose independent rect. 2 15
67 109.41 precipitation 0.1 270 < th dose independent rect. 19 16
68 109.41 precipitation 0.1 270 < th dose dependent rect. 2 15
69 109.41 precipitation 0.1 270 < th dose dependent rect. 19 16
83 109.71 atmosphere 1015.0 270 < th dose independent rect. 11 8
84 109.71 temperature 10.0 270 > th dose independent rect. 19 16
85 109.71 atmosphere 995.0 270 > th dose independent rect. 19 16
86 109.73 wind 9.0 270 < th dose independent rect. 13 18
102 109.97 humidity 50.0 270 > th dose independent rect. 19 16
103 109.98 wind 9.0 270 < th dose independent rect. 19 16
106 110.09 temperature 10.0 270 > th dose independent rect. 7 6
107 110.09 atmosphere 995.0 270 > th dose independent rect. 7 6
108 110.09 atmosphere 1015.0 270 < th dose independent rect. 7 6
109 110.09 temperature 10.0 270 > th dose independent rect. 13 18
110 110.12 precipitation 0.1 270 < th dose independent rect. 7 6
112 110.12 precipitation 0.1 270 < th dose dependent rect. 7 6
123 110.35 wind 1.0 270 > th dose independent rect. 12 6
140 110.67 wind 9.0 270 < th dose independent rect. 7 6
143 110.71 precipitation 0.1 270 < th dose independent rect. 18 18
144 110.71 precipitation 0.1 270 < th dose dependent rect. 18 18
148 110.75 precipitation 0.1 270 < th dose independent rect. 11 8
150 110.75 precipitation 0.1 270 < th dose dependent rect. 11 8
160 110.89 atmosphere 995.0 270 > th dose independent rect. 11 8
163 110.93 wind 1.0 270 > th dose independent rect. 7 6
173 111.09 radiation 40.0 270 < th dose independent rect. 14 17
181 111.19 atmosphere 995.0 270 > th dose independent rect. 18 18
217 111.46 wind 9.0 270 < th dose independent rect. 11 22
223 111.52 wind 1.0 270 > th dose independent rect. 18 18
226 111.58 wind 1.0 270 > th dose independent rect. 19 16
230 111.63 humidity 50.0 270 > th dose independent rect. 13 4
233 111.67 humidity 50.0 90 > th dose dependent rect. 13 6
239 111.75 temperature 30.0 270 < th dose independent rect. 18 8
249 111.82 atmosphere 995.0 270 > th dose independent rect. 12 6
265 112.03 humidity 50.0 270 > th dose independent rect. 18 18
266 112.03 atmosphere 995.0 270 > th dose independent rect. 13 18
267 112.11 wind 1.0 270 > th dose independent rect. 8 4
273 112.16 precipitation 0.1 270 < th dose independent rect. 12 6
274 112.16 precipitation 0.1 270 < th dose dependent rect. 12 6
303 112.45 radiation 1.0 10 > th dose independent rect. 10 4
319 112.61 humidity 50.0 10 > th dose dependent rect. 14 20
320 112.63 wind 9.0 270 < th dose independent rect. 9 2
321 112.63 humidity 90.0 270 < th dose independent rect. 12 6
334 112.77 radiation 40.0 30 < th dose independent rect. 12 8
346 112.95 humidity 50.0 10 > th dose independent rect. 14 20
350 112.99 precipitation 0.1 270 < th dose independent rect. 13 18
351 112.99 precipitation 0.1 270 < th dose dependent rect. 13 18
376 113.25 humidity 50.0 10 > th dose dependent rect. 13 7
383 113.32 temperature 30.0 270 < th dose independent rect. 8 4
414 113.50 temperature 30.0 90 < th dose independent rect. 13 6
445 113.69 humidity 50.0 10 > th dose independent rect. 14 6
462 113.81 humidity 50.0 270 > th dose independent rect. 8 4
472 113.89 humidity 50.0 10 > th dose independent rect. 3 17
493 114.07 humidity 50.0 270 > th dose independent rect. 9 2
496 114.10 radiation 40.0 10 < th dose dependent rect. 13 7
506 114.14 humidity 50.0 270 > th dose independent rect. 7 6
512 114.24 atmosphere 995.0 10 > th dose independent rect. 14 20
516 114.27 wind 1.0 90 > th dose dependent rect. 13 7
520 114.30 temperature 30.0 270 < th dose independent rect. 9 2
537 114.45 temperature 10.0 10 > th dose independent rect. 10 4
539 114.45 atmosphere 995.0 10 > th dose independent rect. 10 4
540 114.45 atmosphere 1015.0 10 < th dose independent rect. 10 4
541 114.45 precipitation 0.1 10 < th dose independent rect. 10 4
544 114.45 temperature 10.0 10 > th dose independent rect. 14 20
545 114.45 precipitation 0.1 10 < th dose dependent rect. 10 4
547 114.46 radiation 40.0 1440 < th dose dependent rect. 21 8
549 114.47 atmosphere 995.0 10 > th dose independent rect. 14 6
553 114.52 humidity 90.0 270 < th dose independent rect. 13 4
566 114.58 wind 1.0 270 > th dose dependent rect. 13 4
574 114.62 temperature 30.0 10 < th dose independent rect. 12 8
578 114.63 wind 9.0 10 < th dose independent rect. 14 20
579 114.65 wind 1.0 10 > th dose independent rect. 14 6
586 114.72 temperature 10.0 10 > th dose independent rect. 14 6
588 114.72 atmosphere 1010.0 10 < th dose independent rect. 14 6
590 114.72 temperature 10.0 10 > th dose independent rect. 20 18
591 114.72 atmosphere 995.0 10 > th dose independent rect. 20 18
608 114.83 humidity 90.0 90 < th dose independent rect. 9 5
621 114.88 precipitation 0.1 10 < th dose independent rect. 20 18
624 114.88 precipitation 0.1 10 < th dose dependent rect. 20 18
629 114.93 wind 9.0 10 < th dose independent rect. 14 6
635 114.96 temperature 10.0 270 > th dose dependent rect. 11 8
637 114.97 wind 9.0 10 < th dose independent rect. 10 4
655 115.04 humidity 90.0 10 < th dose independent rect. 10 4
681 115.10 precipitation 0.1 10 < th dose independent rect. 14 6
686 115.10 precipitation 0.1 10 < th dose dependent rect. 14 6
772 115.44 atmosphere 995.0 270 > th dose dependent rect. 8 4
774 115.46 wind 9.0 10 < th dose independent rect. 20 18
777 115.50 humidity 50.0 270 > th dose dependent rect. 22 10
780 115.51 atmosphere 995.0 270 > th dose dependent rect. 9 2
789 115.56 radiation 1.0 270 > th dose independent rect. 17 21
805 115.68 wind 9.0 10 < th dose independent rect. 3 17
825 115.75 precipitation 0.1 270 < th dose independent rect. 8 15
827 115.75 precipitation 0.1 270 < th dose dependent rect. 8 15
829 115.77 humidity 50.0 90 > th dose dependent rect. 3 16
840 115.80 temperature 10.0 270 > th dose dependent rect. 12 6
842 115.81 temperature 15.0 10 > th dose independent rect. 20 7
880 115.98 radiation 40.0 90 < th dose dependent rect. 12 7
896 116.03 temperature 10.0 1440 > th dose independent rect. 11 4
902 116.03 temperature 10.0 1440 > th dose independent rect. 15 20
905 116.03 radiation 1.0 1440 < th dose dependent rect. 21 7
909 116.04 temperature 10.0 1440 > th dose independent rect. 21 7
912 116.04 temperature 30.0 1440 < th dose independent rect. 21 7
916 116.04 humidity 50.0 1440 > th dose independent rect. 21 7
922 116.04 atmosphere 995.0 1440 > th dose independent rect. 21 7
923 116.04 radiation 1.0 1440 < th dose independent rect. 21 7
943 116.04 temperature 10.0 1440 > th dose independent rect. 4 17
963 116.15 temperature 30.0 10 < th dose independent rect. 20 7
964 116.15 humidity 50.0 10 > th dose independent rect. 20 7
967 116.15 atmosphere 995.0 10 > th dose independent rect. 20 7
968 116.15 radiation 1.0 10 < th dose independent rect. 20 7
973 116.15 temperature 10.0 10 > th dose independent rect. 3 17
975 116.15 atmosphere 1015.0 10 < th dose independent rect. 3 17
976 116.15 radiation 1.0 10 < th dose dependent rect. 20 7
982 116.17 wind 9.0 10 < th dose independent rect. 20 7
985 116.20 atmosphere 1015.0 270 < th dose independent rect. 18 7
991 116.22 atmosphere 995.0 10 > th dose independent rect. 3 17