Os04g0576800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.
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Os04g0576800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.73 | 0.378 | 10.1 | -0.222 | 1.62 | -0.96 | 0.592 | -0.422 | -0.114 | 9.32 | 15.26 | 9 | -- | -- |
| 65.07 | 0.376 | 10.1 | -0.223 | 1.63 | -0.95 | 1.02 | -- | -0.113 | 9.37 | 15.05 | 8 | -- | -- |
| 65.67 | 0.377 | 10.1 | -0.165 | 1.64 | -0.956 | -- | -0.576 | -0.099 | 9.25 | 14.93 | 10 | -- | -- |
| 68.78 | 0.386 | 10.1 | -0.187 | 1.59 | -0.987 | -- | -- | -0.115 | 9.28 | 15.21 | 8 | -- | -- |
| 130.08 | 0.531 | 10.2 | -0.1 | -- | -1.85 | -- | -0.639 | -0.124 | -- | 9.077 | 8 | -- | -- |
| 80.5 | 0.421 | 10.1 | -0.214 | 2.51 | -- | 1.08 | -- | -0.0975 | 10.3 | -- | -- | -- | -- |
| 85.18 | 0.432 | 10.1 | -0.171 | 2.51 | -- | -- | -- | -0.0949 | 10.3 | -- | -- | -- | -- |
| 131.74 | 0.535 | 10.2 | -0.141 | -- | -1.88 | -- | -- | -0.113 | -- | 10.4 | 2 | -- | -- |
| 69.71 | 0.389 | 10.1 | -- | 1.59 | -0.988 | -- | -- | -0.0917 | 9.28 | 15.21 | 8 | -- | -- |
| 468.02 | 1.01 | 10.2 | -0.21 | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
| 85.95 | 0.434 | 10.1 | -- | 2.51 | -- | -- | -- | -0.0758 | 10.3 | -- | -- | -- | -- |
| 132.26 | 0.536 | 10.2 | -- | -- | -1.88 | -- | -- | -0.0978 | -- | 10.31 | 2 | -- | -- |
| 469.19 | 1.01 | 10.2 | -- | -- | -- | -- | -- | -0.0785 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 2 | 62.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 7 | 63.19 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 9 | 63.25 | radiation | 10 | 90 | < th | dose dependent | sin | 3 | NA |
| 12 | 63.60 | radiation | 20 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 13 | 63.79 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 6 |
| 24 | 64.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 39 | 64.54 | humidity | 80 | 10 | > th | dose dependent | sin | 2 | NA |
| 54 | 64.72 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 17 |
| 57 | 64.77 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 10 |
| 58 | 64.78 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 62 | 64.82 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 67 | 64.83 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 68 | 64.87 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 102 | 65.18 | humidity | 90 | 10 | < th | dose independent | rect. | 6 | 10 |
| 114 | 65.22 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 122 | 65.31 | temperature | 25 | 30 | > th | dose independent | sin | 5 | NA |
| 129 | 65.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 143 | 65.55 | temperature | 25 | 30 | < th | dose independent | rect. | 1 | 9 |
| 155 | 65.59 | temperature | 25 | 10 | > th | dose dependent | sin | 7 | NA |
| 156 | 65.59 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 166 | 65.66 | radiation | 20 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 186 | 65.74 | radiation | 10 | 90 | > th | dose independent | sin | 5 | NA |
| 198 | 65.77 | radiation | 20 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 199 | 65.78 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 21 |
| 200 | 65.79 | radiation | 20 | 10 | < th | dose dependent | no | NA | NA |
| 223 | 65.92 | radiation | 20 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 247 | 66.03 | temperature | 25 | 30 | < th | dose independent | sin | 4 | NA |
| 258 | 66.09 | temperature | 25 | 30 | < th | dose independent | rect. | 1 | 13 |
| 261 | 66.11 | radiation | 10 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 277 | 66.18 | radiation | 10 | 90 | < th | dose independent | rect. | 1 | 14 |
| 278 | 66.18 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 23 |
| 310 | 66.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 317 | 66.28 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 341 | 66.38 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 23 |
| 342 | 66.39 | radiation | 1 | 90 | < th | dose independent | sin | 2 | NA |
| 363 | 66.45 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 12 |
| 491 | 66.84 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 10 |
| 523 | 66.88 | radiation | 10 | 90 | < th | dose independent | rect. | 7 | 23 |
| 684 | 67.30 | humidity | 90 | 30 | < th | dose independent | sin | 2 | NA |
| 703 | 67.34 | radiation | 10 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 745 | 67.45 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 11 |
| 746 | 67.45 | radiation | 10 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 937 | 67.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 938 | 67.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 943 | 67.88 | humidity | 90 | 30 | < th | dose independent | rect. | 6 | 12 |
| 950 | 67.88 | radiation | 10 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 973 | 67.94 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 2 |
| 982 | 67.95 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 18 |
| 990 | 67.98 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 23 |