Os04g0574600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os04g0574600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.18 | 0.236 | 8.81 | 0.273 | 0.117 | 0.319 | 0.0958 | 0.127 | 0.153 | 22.8 | 20.4 | 178 | -- | -- |
| 25.18 | 0.234 | 8.82 | 0.263 | 0.122 | 0.302 | 0.0728 | -- | 0.152 | 22.7 | 20.6 | 142 | -- | -- |
| 25.19 | 0.234 | 8.81 | 0.266 | 0.122 | 0.313 | -- | 0.0786 | 0.152 | 22.9 | 20.45 | 153 | -- | -- |
| 25.2 | 0.234 | 8.82 | 0.257 | 0.124 | 0.301 | -- | -- | 0.15 | 22.8 | 20.54 | 142 | -- | -- |
| 25.99 | 0.237 | 8.81 | 0.279 | -- | 0.308 | -- | 0.163 | 0.158 | -- | 20.4 | 231 | -- | -- |
| 28.66 | 0.251 | 8.8 | 0.344 | 0.0905 | -- | 0.157 | -- | 0.208 | 20.4 | -- | -- | -- | -- |
| 28.73 | 0.251 | 8.8 | 0.339 | 0.0898 | -- | -- | -- | 0.208 | 20.8 | -- | -- | -- | -- |
| 26.07 | 0.238 | 8.81 | 0.257 | -- | 0.286 | -- | -- | 0.15 | -- | 20.5 | 188 | -- | -- |
| 26.86 | 0.241 | 8.82 | -- | 0.134 | 0.326 | -- | -- | 0.125 | 22.7 | 20.41 | 162 | -- | -- |
| 29.19 | 0.252 | 8.8 | 0.339 | -- | -- | -- | -- | 0.207 | -- | -- | -- | -- | -- |
| 31.77 | 0.264 | 8.81 | -- | 0.0892 | -- | -- | -- | 0.17 | 21 | -- | -- | -- | -- |
| 27.63 | 0.245 | 8.82 | -- | -- | 0.345 | -- | -- | 0.117 | -- | 20.4 | 220 | -- | -- |
| 32.23 | 0.265 | 8.81 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.41 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 6 | 23.71 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 7 | 23.78 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 12 | 23.85 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 43 | 24.11 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 44 | 24.11 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 45 | 24.11 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 54 | 24.15 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 17 |
| 70 | 24.20 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 86 | 24.25 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 96 | 24.29 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 98 | 24.30 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 104 | 24.31 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 112 | 24.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 129 | 24.39 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 138 | 24.43 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 141 | 24.43 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 198 | 24.55 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 210 | 24.60 | temperature | 20 | 10 | > th | dose independent | sin | 7 | NA |
| 243 | 24.66 | wind | 9 | 14400 | < th | dose independent | sin | 4 | NA |
| 289 | 24.73 | wind | 9 | 14400 | > th | dose independent | sin | 4 | NA |
| 325 | 24.76 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 344 | 24.79 | temperature | 20 | 90 | > th | dose independent | sin | 8 | NA |
| 350 | 24.80 | temperature | 20 | 10 | < th | dose independent | sin | 7 | NA |
| 351 | 24.80 | temperature | 25 | 270 | < th | dose independent | sin | 10 | NA |
| 365 | 24.81 | wind | 9 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 375 | 24.82 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 398 | 24.84 | temperature | 20 | 30 | > th | dose independent | rect. | 19 | 9 |
| 410 | 24.85 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 21 |
| 411 | 24.85 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 413 | 24.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 463 | 24.90 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 7 |
| 496 | 24.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 500 | 24.94 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 10 |
| 516 | 24.95 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 517 | 24.95 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 528 | 24.96 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 536 | 24.97 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 550 | 24.99 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 572 | 25.01 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 624 | 25.05 | wind | 9 | 14400 | > th | dose dependent | sin | 4 | NA |
| 661 | 25.08 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 674 | 25.09 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 20 |
| 688 | 25.10 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 19 |
| 698 | 25.11 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 18 |
| 708 | 25.12 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 16 |
| 720 | 25.13 | wind | 3 | 14400 | < th | dose independent | sin | 7 | NA |
| 746 | 25.14 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 761 | 25.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 765 | 25.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 776 | 25.16 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 800 | 25.18 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 13 |
| 809 | 25.18 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 814 | 25.19 | wind | 3 | 14400 | > th | dose independent | sin | 7 | NA |
| 854 | 25.21 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 861 | 25.21 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 878 | 25.22 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 909 | 25.25 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 926 | 25.25 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 22 |