Os04g0573200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0573200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.4 | 0.365 | 10.3 | -0.929 | 0.357 | -1.02 | 0.713 | -1.82 | -0.107 | 14 | 1.261 | 11498 | -- | -- |
| 65.33 | 0.376 | 10.3 | -0.507 | 0.291 | -0.692 | 0.744 | -- | -0.0595 | 14 | 1.621 | 14337 | -- | -- |
| 62.21 | 0.367 | 10.3 | -0.886 | 0.359 | -1.03 | -- | -1.78 | -0.106 | 14.1 | 1.242 | 11468 | -- | -- |
| 65.39 | 0.377 | 10.3 | -0.38 | 0.278 | -0.695 | -- | -- | -0.0519 | 14.1 | 1.55 | 25857 | -- | -- |
| 68.23 | 0.385 | 10.3 | -0.893 | -- | -1.08 | -- | -1.87 | -0.116 | -- | 1.26 | 12808 | -- | -- |
| 80.05 | 0.419 | 10.3 | -0.732 | 0.406 | -- | 0.796 | -- | -0.243 | 13.9 | -- | -- | -- | -- |
| 82.46 | 0.425 | 10.3 | -0.707 | 0.41 | -- | -- | -- | -0.238 | 14.2 | -- | -- | -- | -- |
| 72.47 | 0.396 | 10.3 | -0.47 | -- | -0.777 | -- | -- | -0.0497 | -- | 1.534 | 25788 | -- | -- |
| 64.52 | 0.374 | 10.2 | -- | 0.413 | -0.897 | -- | -- | 0.138 | 14.3 | 1.02 | 47520 | -- | -- |
| 92.48 | 0.449 | 10.3 | -0.724 | -- | -- | -- | -- | -0.248 | -- | -- | -- | -- | -- |
| 95.64 | 0.457 | 10.3 | -- | 0.423 | -- | -- | -- | -0.159 | 14.2 | -- | -- | -- | -- |
| 71.06 | 0.393 | 10.2 | -- | -- | -0.874 | -- | -- | 0.101 | -- | 1.51 | 30118 | -- | -- |
| 106.32 | 0.481 | 10.3 | -- | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 2 | 60.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 3 | 60.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 11 | 60.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 22 | 60.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 32 | 60.44 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 33 | 60.45 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 67 | 60.54 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 68 | 60.55 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 69 | 60.56 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 71 | 60.57 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 76 | 60.59 | radiation | 1.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 81 | 60.60 | radiation | 1.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 83 | 60.60 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 106 | 60.63 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 273 | 60.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 286 | 60.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 293 | 60.84 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 298 | 60.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 303 | 60.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 12 |
| 323 | 60.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 341 | 60.87 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 378 | 60.91 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 2 | 16 |
| 392 | 60.92 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 396 | 60.92 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 418 | 60.94 | radiation | 1.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 426 | 60.94 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 438 | 60.94 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 444 | 60.95 | radiation | 1.0 | 43200 | < th | dose independent | no | NA | NA |
| 514 | 60.96 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 532 | 60.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 16 |
| 547 | 60.97 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 565 | 60.98 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 567 | 60.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 599 | 60.99 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 603 | 61.00 | radiation | 1.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 605 | 61.00 | radiation | 1.0 | 43200 | > th | dose independent | no | NA | NA |
| 898 | 61.07 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 17 | NA |
| 916 | 61.07 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 918 | 61.08 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 17 | NA |