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Os04g0568600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 6-phospho-3-hexuloisomerase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0267) R2 : 0.791
β1 : 1.98 (0.0974) R2dD : 0.196 R2D : 0.185
β2 : 2.4 (0.0662) R2dC : 0.605 R2C : 0.6
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.169 (0.0568) R2dN8 : 0.00542 R2N8 : -0.0115
σ : 0.5
deviance : 114.17
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_____
C
peak time of C : 20.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.69 0.43 14.3 4.11 2.41 60.3 -2.45 122 0.268 20.8 15.09 4048 -- --
94.46 0.456 13.5 1.93 2.39 0.715 -2.3 -- 0.176 20.8 15.09 4048 -- --
102.71 0.472 14.5 4.49 2.39 60.5 -- 123 0.282 20.9 15.16 4335 -- --
102.01 0.47 13.5 2.35 2.42 1.28 -- -- 0.275 20.9 17.08 4371 -- --
428.62 0.964 14.5 4.61 -- 60.7 -- 124 0.255 -- 15.25 4551 -- --
95.42 0.458 13.5 1.9 2.39 -- -2.37 -- 0.169 20.8 -- -- -- --
114.17 0.5 13.5 1.98 2.4 -- -- -- 0.169 20.9 -- -- -- --
429.74 0.966 13.4 2.41 -- 1.32 -- -- 0.279 -- 18.12 4355 -- --
187.61 0.638 13.7 -- 2.34 -1.21 -- -- -0.341 20.9 23.39 8106 -- --
442.29 0.983 13.4 1.98 -- -- -- -- 0.152 -- -- -- -- --
217.12 0.689 13.5 -- 2.39 -- -- -- -0.0515 20.9 -- -- -- --
471 1.01 13.6 -- -- -1.4 -- -- -0.448 -- 24.4 47520 -- --
545.32 1.09 13.5 -- -- -- -- -- -0.0675 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.22 radiation 1.0 1440 < th dose independent rect. 24 5
2 67.65 radiation 20.0 1440 < th dose dependent rect. 24 5
34 72.57 humidity 50.0 43200 > th dose independent rect. 24 4
36 72.73 humidity 70.0 14400 > th dose independent rect. 21 8
62 75.62 temperature 15.0 270 > th dose independent rect. 1 20
64 75.67 temperature 15.0 270 > th dose independent rect. 24 23
73 76.31 humidity 70.0 14400 < th dose independent rect. 21 1
93 77.02 temperature 20.0 30 > th dose independent rect. 4 19
95 77.09 wind 5.0 270 < th dose independent rect. 21 4
96 77.19 temperature 15.0 14400 > th dose independent rect. 8 8
117 77.48 temperature 15.0 14400 > th dose independent rect. 12 1
119 77.48 humidity 70.0 14400 < th dose dependent rect. 20 2
128 77.50 temperature 15.0 14400 < th dose independent rect. 7 7
137 77.57 temperature 15.0 14400 < th dose independent rect. 7 4
147 77.64 temperature 15.0 270 > th dose independent rect. 2 18
163 77.79 temperature 15.0 14400 < th dose dependent rect. 4 13
167 77.82 wind 9.0 270 < th dose dependent rect. 21 4
173 77.86 temperature 15.0 14400 < th dose dependent rect. 3 18
187 77.93 temperature 15.0 14400 < th dose dependent sin 1 NA
198 78.01 temperature 15.0 14400 < th dose dependent rect. 4 6
225 78.07 temperature 15.0 14400 < th dose independent rect. 21 1
234 78.11 temperature 15.0 14400 > th dose independent rect. 21 1
262 78.22 temperature 15.0 14400 < th dose independent rect. 20 3
263 78.23 temperature 15.0 14400 < th dose dependent rect. 16 8
266 78.23 temperature 15.0 14400 < th dose dependent rect. 9 15
267 78.23 temperature 15.0 14400 < th dose dependent rect. 7 18
268 78.24 wind 5.0 270 < th dose independent rect. 23 1
270 78.24 temperature 15.0 14400 < th dose independent rect. 9 15
280 78.27 temperature 15.0 14400 < th dose dependent rect. 9 2
285 78.28 temperature 15.0 14400 < th dose dependent sin 18 NA
301 78.32 wind 5.0 90 < th dose independent rect. 22 6
305 78.33 precipitation 0.1 270 < th dose independent rect. 21 4
308 78.33 precipitation 0.1 270 < th dose dependent rect. 21 4
310 78.34 atmosphere 1015.0 270 < th dose independent rect. 1 20
325 78.37 temperature 15.0 14400 < th dose dependent rect. 20 3
328 78.38 temperature 10.0 270 > th dose independent rect. 21 4
329 78.38 temperature 30.0 270 < th dose independent rect. 21 4
330 78.38 humidity 50.0 270 > th dose independent rect. 21 4
333 78.38 atmosphere 995.0 270 > th dose independent rect. 21 4
334 78.38 radiation 1.0 270 < th dose independent rect. 21 4
340 78.38 radiation 1.0 270 < th dose dependent rect. 21 4
382 78.45 humidity 60.0 14400 > th dose independent rect. 19 13
384 78.46 temperature 15.0 14400 > th dose independent rect. 9 14
388 78.48 temperature 15.0 14400 < th dose independent sin 23 NA
412 78.54 wind 9.0 270 < th dose independent rect. 1 20
418 78.56 temperature 15.0 14400 < th dose dependent rect. 11 1
437 78.60 temperature 15.0 14400 < th dose dependent no NA NA
438 78.61 temperature 15.0 14400 > th dose independent rect. 11 3
442 78.61 temperature 15.0 14400 < th dose dependent rect. 11 23
454 78.63 temperature 15.0 14400 < th dose dependent rect. 14 23
463 78.65 temperature 20.0 270 > th dose independent rect. 11 10
577 78.81 wind 5.0 270 < th dose independent rect. 20 6
578 78.81 humidity 60.0 14400 < th dose independent rect. 19 13
586 78.82 precipitation 0.1 270 < th dose independent rect. 23 1
588 78.82 precipitation 0.1 270 < th dose dependent rect. 23 1
590 78.82 atmosphere 995.0 270 > th dose dependent rect. 22 3
607 78.85 temperature 10.0 270 > th dose independent rect. 23 1
608 78.85 temperature 30.0 270 < th dose independent rect. 23 1
609 78.85 humidity 50.0 270 > th dose independent rect. 23 1
612 78.85 atmosphere 995.0 270 > th dose independent rect. 23 1
613 78.85 radiation 1.0 270 < th dose independent rect. 23 1
620 78.85 radiation 1.0 270 < th dose dependent rect. 23 1
658 78.90 temperature 15.0 14400 < th dose independent rect. 11 4
665 78.92 temperature 15.0 14400 < th dose independent rect. 12 1
708 78.96 atmosphere 1005.0 270 > th dose independent rect. 22 3
716 78.97 wind 1.0 270 > th dose independent rect. 23 1
727 78.99 humidity 50.0 14400 > th dose independent rect. 18 6
758 79.05 radiation 1.0 14400 < th dose dependent rect. 9 1
796 79.13 temperature 15.0 14400 > th dose independent sin 21 NA
812 79.16 humidity 50.0 43200 > th dose independent sin 12 NA
847 79.23 atmosphere 1005.0 270 > th dose independent rect. 23 1
860 79.27 humidity 70.0 14400 > th dose independent rect. 20 2
870 79.29 radiation 1.0 1440 < th dose independent rect. 10 2
871 79.29 wind 1.0 270 > th dose independent rect. 21 4
873 79.29 precipitation 0.1 90 < th dose independent rect. 22 6
874 79.29 radiation 1.0 1440 < th dose dependent rect. 10 2
875 79.29 precipitation 0.1 90 < th dose dependent rect. 22 6
905 79.36 humidity 50.0 43200 > th dose independent rect. 15 19
907 79.36 humidity 50.0 43200 < th dose dependent rect. 16 4
909 79.36 wind 9.0 90 < th dose dependent rect. 22 6
914 79.40 humidity 50.0 43200 < th dose independent rect. 17 14
915 79.40 atmosphere 995.0 90 > th dose dependent rect. 22 6
920 79.41 wind 9.0 270 < th dose dependent rect. 23 1
928 79.42 humidity 50.0 43200 < th dose dependent rect. 16 14
961 79.48 precipitation 0.1 270 < th dose independent rect. 1 20
962 79.48 humidity 50.0 14400 < th dose dependent rect. 9 1
964 79.48 precipitation 0.1 270 < th dose dependent rect. 1 20
969 79.50 humidity 50.0 43200 > th dose independent rect. 15 17
972 79.51 humidity 50.0 43200 < th dose independent sin 11 NA
974 79.51 temperature 10.0 90 > th dose independent rect. 22 6
975 79.51 temperature 30.0 90 < th dose independent rect. 22 6
976 79.51 humidity 50.0 90 > th dose independent rect. 22 6
979 79.51 atmosphere 995.0 90 > th dose independent rect. 22 6
980 79.51 radiation 1.0 90 < th dose independent rect. 22 6
987 79.51 atmosphere 1015.0 90 < th dose independent rect. 4 18
988 79.51 radiation 1.0 90 < th dose dependent rect. 22 6
995 79.52 wind 9.0 90 < th dose independent rect. 4 18