Os04g0567700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ORMDL family protein.
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Os04g0567700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ORMDL family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.86 | 0.277 | 10.8 | 0.393 | 1.09 | -0.0748 | -0.821 | -1.23 | 0.181 | 6 | 51.01 | 5169 | -- | -- |
| 35.26 | 0.277 | 10.7 | 0.514 | 1.09 | -0.384 | -0.731 | -- | 0.187 | 6.01 | 35 | 9759 | -- | -- |
| 36.48 | 0.281 | 10.8 | 0.389 | 1.1 | -0.0916 | -- | -1.1 | 0.182 | 6.02 | 52 | 5234 | -- | -- |
| 36.14 | 0.28 | 10.7 | 0.435 | 1.07 | -0.409 | -- | -- | 0.177 | 6.08 | 43 | 8947 | -- | -- |
| 96.6 | 0.458 | 10.8 | 0.485 | -- | -0.195 | -- | -1.16 | 0.222 | -- | 46 | 5017 | -- | -- |
| 38.12 | 0.289 | 10.8 | 0.314 | 1.1 | -- | -0.73 | -- | 0.195 | 6.03 | -- | -- | -- | -- |
| 39.42 | 0.294 | 10.8 | 0.308 | 1.09 | -- | -- | -- | 0.198 | 6.08 | -- | -- | -- | -- |
| 87.23 | 0.435 | 10.7 | 0.479 | -- | -0.764 | -- | -- | 0.327 | -- | 75 | 2011 | -- | -- |
| 38.66 | 0.29 | 10.8 | -- | 1.06 | -0.442 | -- | -- | 0.158 | 6.11 | 49.39 | 20440 | -- | -- |
| 101.35 | 0.47 | 10.8 | 0.339 | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
| 41.92 | 0.303 | 10.8 | -- | 1.1 | -- | -- | -- | 0.163 | 6.06 | -- | -- | -- | -- |
| 69.93 | 0.389 | 10.7 | -- | -- | -0.755 | -- | -- | 0.279 | -- | 83 | 450 | -- | -- |
| 104.39 | 0.477 | 10.8 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.26 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 33.28 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 3 | 33.29 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 4 | 33.42 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 33.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 11 | 33.65 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 12 | 33.66 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 13 | 33.66 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 28 | 33.69 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 29 | 33.69 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 30 | 33.69 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 36 | 33.70 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 45 | 33.70 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 51 | 33.70 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 61 | 33.73 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 65 | 33.73 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 66 | 33.73 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 67 | 33.73 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 82 | 33.76 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 98 | 33.77 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 107 | 33.78 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 115 | 33.78 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 125 | 33.79 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 127 | 33.79 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 133 | 33.79 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 176 | 33.79 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 186 | 33.80 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 187 | 33.80 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 188 | 33.80 | radiation | 40.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 245 | 33.81 | radiation | 40.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 272 | 33.82 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 276 | 33.82 | radiation | 1.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 326 | 33.82 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 347 | 33.83 | radiation | 30.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 351 | 33.83 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 371 | 33.83 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 422 | 33.83 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 471 | 33.83 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 477 | 33.84 | radiation | 30.0 | 43200 | > th | dose independent | no | NA | NA |
| 480 | 33.84 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 488 | 33.84 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 640 | 33.84 | radiation | 40.0 | 43200 | < th | dose dependent | no | NA | NA |
| 656 | 33.84 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 4 | 14 |
| 990 | 33.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |