Os04g0566700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0566700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.88 | 0.562 | 5.13 | -0.129 | 0.917 | -0.508 | 0.469 | -1.67 | 0.097 | 19.8 | 999 | 5478 | -- | -- |
| 145.3 | 0.561 | 5.11 | -0.11 | 0.887 | -0.713 | 0.643 | -- | 0.112 | 19.8 | 998.9 | 5640 | -- | -- |
| 143.47 | 0.558 | 5.13 | -0.138 | 0.919 | -0.512 | -- | -1.65 | 0.0965 | 19.7 | 998.9 | 5530 | -- | -- |
| 144.32 | 0.56 | 5.11 | -0.00655 | 0.91 | -0.864 | -- | -- | 0.0923 | 19.7 | 998.4 | 11197 | -- | -- |
| 189.11 | 0.64 | 5.12 | -0.115 | -- | -0.54 | -- | -1.61 | 0.0734 | -- | 999 | 5530 | -- | -- |
| 161.53 | 0.596 | 5.1 | -0.19 | 0.919 | -- | 0.477 | -- | 0.158 | 19.8 | -- | -- | -- | -- |
| 162.16 | 0.596 | 5.1 | -0.201 | 0.921 | -- | -- | -- | 0.159 | 19.7 | -- | -- | -- | -- |
| 188.5 | 0.639 | 5.09 | -0.0436 | -- | -0.837 | -- | -- | 0.0765 | -- | 996.7 | 11416 | -- | -- |
| 143.25 | 0.557 | 5.11 | -- | 0.918 | -0.836 | -- | -- | 0.0951 | 19.7 | 996.8 | 11416 | -- | -- |
| 207.95 | 0.674 | 5.08 | -0.213 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 163.23 | 0.598 | 5.09 | -- | 0.923 | -- | -- | -- | 0.181 | 19.7 | -- | -- | -- | -- |
| 188.55 | 0.64 | 5.09 | -- | -- | -0.845 | -- | -- | 0.0804 | -- | 996.7 | 11416 | -- | -- |
| 209.14 | 0.675 | 5.07 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.21 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 2 | 135.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 135.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 135.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 135.65 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 7 | 136.48 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 8 | 136.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 136.65 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 14 | 137.08 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 17 | 137.29 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 23 | 137.66 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 28 | 137.74 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 34 | 137.97 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 39 | 138.00 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 46 | 138.21 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 51 | 138.31 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 76 | 138.63 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 83 | 138.69 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 88 | 138.76 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 136 | 139.39 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 152 | 139.51 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 172 | 139.68 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 222 | 140.00 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 275 | 140.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 354 | 140.65 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 357 | 140.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 359 | 140.67 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 374 | 140.76 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 421 | 141.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 440 | 141.08 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 442 | 141.09 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 443 | 141.09 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 447 | 141.10 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 466 | 141.14 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 533 | 141.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 544 | 141.25 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 616 | 141.38 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 751 | 141.64 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 759 | 141.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 765 | 141.70 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 813 | 141.80 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 927 | 142.12 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 951 | 142.15 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |